New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1564136	52 (0.980)	4 (0.080)	4/244	NT	6.6%	coding (1193/1473 nt)	pitB	phosphate transporter
	?	NC_002947	= 1564229	63 (1.240)					coding (1100/1473 nt)	pitB	phosphate transporter

CCAGACGACAGCACGTGGGTGGTCGATACCGGCAGGGCGAATACGTTGGCCATGCCGATGGCGCAGGCTGCGGTGATCTGTGCCGACATGCCTTGGGCATAGGTCATGCCTTGTTTGCCGATCTTCTCGCCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1564001‑1564136 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgCCACCACCGAATACGCCCCGTTCTGGGTGATCGTGGCCGTCGCACTGGCCCTTGGCCTGGGTACCATGGTTGGCTGGAAGCGCGTGGTGTTGACGGTGGGCGAGAAGATCGGCAAACAAGGCATGACCTATGCCCAAGGCATGTCGG  <  NC_002947/1564229‑1564083                                                                                                                                                                                                                                                                                             CCAGACGACAGCACGTGGGTGGTCGATACCGGCAGGGCGAATAAGTTCGCCATGCCGATGGCGCAGGCTGCCCTGATCTGTGCCGACATGCCTTGGGCATAGGTCATGCCTTGTTTGCCGATCTTCTCGCCCACCGCCACCACCGAATA                                                                                                                                        >  1:219185/1‑149                                                                                 TGCCGACATGCCTTGGGCATAGGTCATGCCTTGTTTGCCGATCTTCTCGCCCACCGCCACCACCGAATACGCCCCGTTCTGGGTGATCGTGGCCGTCGCACTGGCCCCTGGCCTGGGTACCATGGTTGGCTGGAAGCGCGTGGTGTTGA                                                        >  6:229051/1‑149                                                                                    CGACATGCCTTGGGCATAGGTCATGCCTTGTTTGCCGATCTTCTCGCCCACCGCCACCACCGAATACGCCCCGTTCTGGGTGATCGTGGCCGTCGCACTGGCCCCTGGCCTGGGTACCATGGTTGGCTGGAAGCGCGTGGTGTTGACGG                                                     <  5:229051/149‑1                                                                                       CATGCCTTGGGCATAGGTCATGCCTTGTTTGCCGATCTTCTCGCCCACCGCCACCACCGAATACGCCCCGTTCTGGGTGATCGTGGCCGTCGCACTGGCCCTTGGCCTGTGTACCATGGTTGGCTGGAAGCGCGTGGTGTTAACTGTGG                                                  <  2:219185/149‑1                                                                                                                                       CGCCACCACCGAATACGCCCCGTTCTGGGTGATCGTGGCCGTCGCACTGGCCCTTGGCCTGGGTACCATGGTTGGCTGGAAGCGCGTGGTGTTGACGGTGGGCGAGAAGATCGGCAAACAAGGCATGACCTATGCCCAAGGCATGTCGG  <  7:153843/149‑1                                                                                                                                                                                                                                                                                             CCAGACGACAGCACGTGGGTGGTCGATACCGGCAGGGCGAATACGTTGGCCATGCCGATGGCGCAGGCTGCGGTGATCTGTGCCGACATGCCTTGGGCATAGGTCATGCCTTGTTTGCCGATCTTCTCGCCCACCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1564001‑1564136 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccgCCACCACCGAATACGCCCCGTTCTGGGTGATCGTGGCCGTCGCACTGGCCCTTGGCCTGGGTACCATGGTTGGCTGGAAGCGCGTGGTGTTGACGGTGGGCGAGAAGATCGGCAAACAAGGCATGACCTATGCCCAAGGCATGTCGG  <  NC_002947/1564229‑1564083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.