| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1906968 = | 50 (0.950) | 4 (0.080) | 4/238 | NT | 8.6% | coding (771/951 nt) | PP_1707 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein |
| ? | NC_002947 | 1907005 = | 38 (0.770) | coding (734/951 nt) | PP_1707 | D‑isomer specific 2‑hydroxyacid dehydrogenase family protein | |||||
ATCAATCGCGACGTGCTTCAGGCGTTGGGCAGCGAGGGGTACCTGATCAACATCGCACGCGGCAAGCTGGTAGATGAGCCTGCGTTGATCGCCGCGCTGCAGGCTGGCGAGATCGGTGGCGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1907093‑1906968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcgATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTG > NC_002947/1907005‑1907148 ATCAATCGCGACGTGCTTCAGGCGTTGGGCAGCGAGGGGTACCTGATCAACATCGCACGCGGCAAGCTGGTAGATGAGCCTGCGTTGATCGCCGCGCTGCAGGCTGGCGAGATCGGTGGCG > 2:206583/1‑121 TCGCCGCGCTGCAGGCTGGCGAGATCGGTGGCGCGGCGATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTT > 5:60334/1‑142 TCGCCGCGCTGCAGGCTGGCGAGATCGGTGGCGCGGCGATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTT < 6:60334/142‑1 CCGCGCTGCAGGCTGGCGAGATCGGTGGCGCGGCGATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAG < 1:265110/127‑1 CCGCGCTGCAGGCTGGCGAGATCGGTGGCGCGGCGATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAG > 2:265110/1‑127 CGGCGATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTG < 7:148512/149‑1 GCGATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTG < 7:209155/147‑1 ATCAATCGCGACGTGCTTCAGGCGTTGGGCAGCGAGGGGTACCTGATCAACATCGCACGCGGCAAGCTGGTAGATGAGCCTGCGTTGATCGCCGCGCTGCAGGCTGGCGAGATCGGTGGCGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1907093‑1906968‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggcgATCAACGCAGGCTCATCTACCAGCTTGCCGCGTGCGATGTTGATCAGGTACCCCTCGCTGCCCAACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTG > NC_002947/1907005‑1907148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |