| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1917222 = | 52 (0.980) | 6 (0.120) | 4/232 | NT | 11.6% | coding (1003/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase |
| ? | NC_002947 | 1917301 = | 44 (0.910) | coding (924/1083 nt) | PP_1718 | EAL domain‑containing diguanylate phosphodiesterase | |||||
GGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1917373‑1917222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaataGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTG > NC_002947/1917301‑1917444 GGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCG > 6:163708/1‑148 GCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAA < 8:34191/149‑1 ATTGGAAGTGGTGGATGCCGATGGGAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTAC < 2:194618/140‑1 ATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTAC > 1:194618/1‑140 TTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTATTCGCGGGTAAACCCGCtcctac < 5:173285/149‑7 GGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTAC < 8:22451/74‑1 GGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTAC > 7:22451/1‑74 CGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGG > 2:192335/1‑148 GCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACT > 5:250586/1‑126 GCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACT < 6:250586/126‑1 ctattcGCGGGTGAACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCA > 7:247712/7‑149 AGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAA < 1:192335/149‑1 GCGGGTGAACCCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAA < 8:247712/148‑1 CCCTCGAATAGGCCGGCACAGGCAGCGCATCCCTGTTAATCAACCCTCTCCCCCTGCCATCGGCATCCACCACTTCCAATGCATCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTC < 3:192108/149‑1 CCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCG > 8:27470/1‑149 CCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGG > 7:175219/1‑131 CCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGG < 8:175219/131‑1 CCGCGAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCAATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCG > 2:307004/1‑149 GAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTG < 1:307004/149‑1 GAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTG > 7:293422/1‑149 GAATAGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTG > 8:179428/1‑126 GGCATTGGAAGTGGTGGATGCCGATGGCAGGGGGTGCGGGTTGATTCACAGGGATGCGCTGCCTGTGCCGGCCTATTCGCGGGTGAACCCGCTCCTACGGGGGCCTGTGCCCAATCACCAATCAGGCGTAGGAGCGGGTTTACCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1917373‑1917222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgcgaataGGCCGGCACAGGCAGCGCATCCCTGTGAATCAACCCGCACCCCCTGCCATCGGCATCCACCACTTCCAATGCCTCCAGGTGCTGGTATCGGCCAAACAGCTCCAGCAGCTGCCCGATCGTGGCATTCAAGTGCACTGTCGGTTG > NC_002947/1917301‑1917444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |