| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1949570 = | 54 (1.020) | 3 (0.060) | 3/232 | NT | 6.5% | coding (85/1746 nt) | PP_1749 | acetyltransferase |
| ? | NC_002947 | 1949614 = | 37 (0.770) | coding (41/1746 nt) | PP_1749 | acetyltransferase | |||||
CACTGCGCGGTTCCAAGCTGTGGCAACTGGCGGCGCTGAACCTGTGGCTGAGCGAACAAGGAATCTGACCGATGAAAGCCCATGAAATCGCTTATGGTCAGCGCCTGCTGCGCGGCCAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1949725‑1949570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAGGC > NC_002947/1949614‑1949758 CACTGCGCGGTTCCAAGCTGTGGCAACTGGCGGCGCTGAACCTGTGGCTGAGCGAACAAGGAATCTGACCGATGAAAGCCCATGAAATCGCTTATGGTCAGCGCCTGCTGCGCGGCCAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGC < 5:106582/149‑1 GAACAAGGAATCTGACCGATGAAAGCCCATGAAATCGCTTATGGTCAGCGCCTGCTGCGCGGCCAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGC < 3:264661/96‑1 GAACAAGGAATCTGACCGATGAAAGCCCATGAAATCGCTTATGGTCAGCGCCTGCTGCGCGGCCAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGC > 4:264661/1‑96 GGCCAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGC > 7:83536/1‑149 CAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTG < 7:212198/139‑1 CAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTG > 8:212198/1‑139 GCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCAT‑GGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAG > 8:326627/1‑148 CCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGC < 6:106582/149‑1 CCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAG > 8:201242/1‑148 GCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAGGC < 3:150796/149‑1 GCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAGG < 7:201242/148‑1 CACTGCGCGGTTCCAAGCTGTGGCAACTGGCGGCGCTGAACCTGTGGCTGAGCGAACAAGGAATCTGACCGATGAAAGCCCATGAAATCGCTTATGGTCAGCGCCTGCTGCGCGGCCAGGCGCCGTCCTACGAGCGCCTGCAGGCGCGCCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1949725‑1949570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAGGC > NC_002947/1949614‑1949758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |