New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1949570 =	54 (1.020)	3 (0.060)	3/232	NT	6.5%	coding (85/1746 nt)	PP_1749	acetyltransferase
	?	NC_002947	1949614 =	37 (0.770)					coding (41/1746 nt)	PP_1749	acetyltransferase

CCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAGGC  >  NC_002947/1949468‑1949758                                                                                                                                                   |                                                                                                                                                 ccTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCcgcg                                                                                                                                                 >  8:178205/1‑148 (MQ=255)    cGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCgcagc                                                                                                                                             <  3:196968/149‑1 (MQ=255)            gAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCATGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTg                                                                                                                                     <  1:88305/149‑1 (MQ=255)                 cGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCa                                                                                                                                 >  7:128480/1‑148 (MQ=255)                 cGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCa                                                                                                                                 >  6:292137/1‑148 (MQ=255)                     tCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGc                                                                                                                            <  5:292137/149‑1 (MQ=255)                        gggTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCt                                                                                                                                      <  4:292863/136‑1 (MQ=255)                        gggTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCt                                                                                                                                      >  3:292863/1‑136 (MQ=255)                         ggTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGAta                                                                                                                        >  1:41922/1‑148 (MQ=255)                          gTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGAtt                                                                                                                        >  4:243752/1‑148 (MQ=255)                          gTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGAtt                                                                                                                        >  3:307284/1‑148 (MQ=255)                           tAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTc                                                                                                                      <  4:307284/149‑1 (MQ=255)                              gtgtGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCAt                                                                                                                    <  7:122475/148‑1 (MQ=255)                              gtgtGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATg                                                                                                                   <  7:178205/149‑1 (MQ=255)                                 tgGCCTATCAACAGCCGGCCCCAGCCGAAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGc                                                                                                                >  1:186824/1‑149 (MQ=255)                                   gCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCtt                                                                                                              >  7:102908/1‑149 (MQ=255)                                   gCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCtt                                                                                                              <  2:186824/149‑1 (MQ=255)                                          aaCAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCg                                                                                                        <  3:243752/148‑1 (MQ=255)                                                       aGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGt                                                                                          <  8:128480/149‑1 (MQ=255)                                                         ccGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTc                                                                                        <  2:150178/149‑1 (MQ=255)                                                               tGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAg                                                                                  >  3:59154/1‑149 (MQ=255)                                                                          cgGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCa                                                                       <  4:59154/149‑1 (MQ=255)                                                                                gTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGcgccg                                                                 >  6:51857/1‑149 (MQ=255)                                                                                   gtgtGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCgccgcc                                                               <  8:102908/148‑1 (MQ=255)                                                                                        gctggctgCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGt                                                                                                      <  6:8302/104‑1 (MQ=255)                                                                                         ctggctgCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGCCCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGc                                                         >  3:125174/1‑148 (MQ=255)                                                                                              tgCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCt                                                                                             <  5:243342/107‑1 (MQ=255)                                                                                              tgCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCt                                                                                             >  6:243342/1‑107 (MQ=255)                                                                                               gCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGcgcc                                                                  >  7:234285/1‑133 (MQ=255)                                                                                               gCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGcgcc                                                                  <  8:234285/133‑1 (MQ=255)                                                                                                 cGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTg                                                <  1:296987/149‑1 (MQ=255)                                                                                                 cGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTg                                                <  1:301993/149‑1 (MQ=255)                                                                                                  gTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGtt                                                           <  6:268367/137‑1 (MQ=255)                                                                                                  gTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGtt                                                           >  5:268367/1‑137 (MQ=255)                                                                                                   tCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTgg                                               >  4:150796/1‑148 (MQ=255)                                                                                                        ggccaggcgccgtcctacgagcgcctgcaggcgcgcctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACcgc                                         >  7:83536‑M2/44‑149 (MQ=255)                                                                                                           caggcgccgtcctacgagcgcctgcaggcgcgcctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTg                                                >  8:212198‑M2/41‑139 (MQ=255)                                                                                                           caggcgccgtcctacgagcgcctgcaggcgcgcctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTg                                                <  7:212198‑M2/99‑1 (MQ=255)                                                                                                              GCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTc                                                                                        >  4:264661‑M1/1‑96 (MQ=255)                                                                                                              GCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTc                                                                                        <  3:264661‑M1/96‑1 (MQ=255)                                                                                                              GCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTg                                   <  5:106582‑M1/149‑1 (MQ=255)                                                                                                                          gcgcTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAgcg                                                                    >  4:29517/1‑104 (MQ=255)                                                                                                                                gTAGGACGGTGCCTGGCCGTGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGc                  <  1:294322/148‑1 (MQ=255)                                                                                                                                gTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGAGCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGGCACAGGTTCAGCGACGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTg                   <  2:73052/147‑1 (MQ=255)                                                                                                                                   ggACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCggg               <  5:51857/148‑1 (MQ=255)                                                                                                                                    gACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGtt             >  4:293272/1‑149 (MQ=255)                                                                                                                                          gcctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCAT‑GGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTcag       >  8:326627‑M2/10‑148 (MQ=255)                                                                                                                                           cctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTcagc      <  6:106582‑M2/141‑1 (MQ=255)                                                                                                                                           cctggccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTcag       >  8:201242‑M2/9‑148 (MQ=255)                                                                                                                                               gccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAgg   <  7:201242‑M2/144‑1 (MQ=255)                                                                                                                                               gccgCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAGGc  <  3:150796‑M2/145‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                 CCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGGCCCCAGCCGCAGTGCACGGCACGCGGCTGGTCGTGTGGCTGGCTGCCGTCGCCGGCCAGGCGCGCCTGCAGGCGCTCGTAGGACGGCGCCTGGCCGCGCAGCAGGCGCTGACCATAAGCGATTTCATGGGCTTTCATCGGTCAGATTCCTTGTTCGCTCAGCCACAGGTTCAGCGCCGCCAGTTGCCACAGCTTGGAACCGCGCAGTGGCGTCAGCTGGCCGTGCGGGTTGCTCAGCAGGC  >  NC_002947/1949468‑1949758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.