| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2042760 = | 55 (1.040) | 4 (0.080) | 4/244 | NT | 7.5% | coding (28/762 nt) | PP_1817 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 2042826 = | 46 (0.910) | coding (94/762 nt) | PP_1817 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
AACAGCGCTTCGCCGCCTGCCGCGTGGATCTGCGCCACGGTGGCCTCGCCGCCGACCGGGTCGAGGTCCGCCACCACCACTTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2042911‑2042760‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGCGCTGTTCATTGCCTGCGACGTGACCCGCGACGCCGAGGTGCGCCAGTTGCATGAGCGCCTGATGGC > NC_002947/2042826‑2042971 AACAGCGCTTCGCCGCCTGCCGCGTGGATCTGCGCCACGGTGGCCTCGCCGCCGACCGGGTCGAGGTCCGCCACCACCACTTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAG > 8:327278/1‑149 CAGCGCTTCGCCGCCTGCCGCGTGGATCTGCGCCACGGTGGCCTCGCCGCCGACCGGGTCGAGGTCCGCCACCACCACTTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGGG < 3:180083/149‑1 TGGCCTCGCCGCCGACCGGGTCGAGGTCCGCCACCACCACTTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGG > 3:179975/1‑110 TGGCCTCGCCGCCGACCGGGTCGAGGTCCGCCACCACCACTTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGG < 4:179975/110‑1 CTTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGC > 5:204547/1‑148 TTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGGCGGCGGGGCGGCACCCGGGGCGCAGATACGCGCGGCAGGCGGCG > 6:359663/1‑148 CATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCCGCACCCGCGCCGGTCACCAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGC > 1:244930/1‑149 CCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGCGCTG < 6:204547/149‑1 GGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGCGCTGTTCATTGCCTGCGACGTGACCCGCGACGCCGAGGTGCGCCAGTTGCATGAGCGCCTGATGGC > 8:4042/1‑149 AACAGCGCTTCGCCGCCTGCCGCGTGGATCTGCGCCACGGTGGCCTCGCCGCCGACCGGGTCGAGGTCCGCCACCACCACTTTCATGCCCTCGTGGGCGAACGCCAGGGCGGTTGCCCGGCCGATGCCGGCACCCGCGCCGGTCACCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2042911‑2042760‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGCGCTGTTCATTGCCTGCGACGTGACCCGCGACGCCGAGGTGCGCCAGTTGCATGAGCGCCTGATGGC > NC_002947/2042826‑2042971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |