| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2042760 = | 55 (1.040) | 4 (0.080) | 4/244 | NT | 7.5% | coding (28/762 nt) | PP_1817 | short‑chain dehydrogenase/reductase family oxidoreductase |
| ? | NC_002947 | 2042826 = | 46 (0.910) | coding (94/762 nt) | PP_1817 | short‑chain dehydrogenase/reductase family oxidoreductase | |||||
GCGGTTCCTTAAAATCACTGACAAGCATGGTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGCG > NC_002947/2042614‑2042906 | gccatcaggcgctcatgcaactggcgcacctcggcgtcgcgggtcacgtcgcaggcaatgaacagcgcttcgccgcctgccgcgtggatctgcgccacggtggcctcgccgccgaccgggtcgaggtccgccaccaccactttcatGcc > 8:4042‑M1/147‑149 (MQ=255) tCCTTAAAATCACTGACAAGCATGGTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTgg < 8:251694/148‑1 (MQ=255) ttAAAATCACTGACAAGCATGGTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGAc > 7:101514/1‑149 (MQ=255) aCAAGCATGGTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGc > 6:354762/1‑149 (MQ=255) aGCATGGTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCgg < 8:101514/149‑1 (MQ=255) gTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCgg > 6:47098/1‑149 (MQ=255) gTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCgg > 1:114153/1‑149 (MQ=255) cAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCgg < 4:68902/143‑1 (MQ=255) cAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCgg > 3:68902/1‑143 (MQ=255) aaCCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGc > 6:141771/1‑148 (MQ=255) tgtgATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTg > 1:238558/1‑149 (MQ=255) tgatgaTGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTg < 2:238558/147‑1 (MQ=255) tgatgaTGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGc < 5:354762/149‑1 (MQ=255) atgatgCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCg < 2:114153/148‑1 (MQ=255) cccGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTg < 7:239831/136‑1 (MQ=255) cccGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTg > 8:239831/1‑136 (MQ=255) ccGGCCGAGTGGTGGCTGACTATGTTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGATCGCCCAc > 4:267981/1‑147 (MQ=255) cagcgcttcgccgcctgccgcgtggatctgcgccacggtggcctcgccgccgaccgggtcgaggtccgccaccaccactttcatGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAggg < 6:204547‑M1/65‑1 (MQ=255) gAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCAt < 5:141771/149‑1 (MQ=255) gcttcgccgcctgccgcgtggatctgcgccacggtggcctcgccgccgaccgggtcgaggtccgccaccaccactttcatGCCCTGGTGACCGGCGCGGGTGCGGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATg > 1:244930‑M1/81‑149 (MQ=255) cgccgcctgccgcgcgtatctgcgccccgggtgccgccccgccgcccgggtcgaggtccgccaccaccactttcatGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGaaa > 6:359663‑M1/77‑148 (MQ=255) gccgcctgccgcgtggatctgcgccacggtggcctcgccgccgaccgggtcgaggtccgccaccaccactttcatGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAg > 5:204547‑M1/76‑148 (MQ=255) gCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAgtgg > 2:311508/1‑149 (MQ=255) gCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAgtgg < 5:47098/149‑1 (MQ=255) gACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAgtggtgg > 5:71552/1‑149 (MQ=255) aCTATGTTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAgtggtg < 3:267981/147‑1 (MQ=255) tATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGtggtggtgg > 3:258542/1‑149 (MQ=255) ctctGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGa > 6:14306/1‑149 (MQ=255) tctGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGAc > 2:154232/1‑149 (MQ=255) tGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGAc < 4:258542/147‑1 (MQ=255) tGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCt > 1:237064/1‑149 (MQ=255) ccccACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGccc > 1:211739/1‑114 (MQ=255) ccccACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGccc < 2:211739/114‑1 (MQ=255) ccccACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCAGGAAAGTGGTGGTGGCGGCCCTCgcc > 6:30975/1‑147 (MQ=255) cccaATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGt < 6:71552/149‑1 (MQ=255) ccaATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTc < 5:14306/149‑1 (MQ=255) ccaATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTc > 4:329742/1‑149 (MQ=255) caATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTcg > 6:358664/1‑149 (MQ=255) aaTCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTcgg > 2:249144/1‑149 (MQ=255) tCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCggcggc > 6:55487/1‑147 (MQ=255) tCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCggcggc > 2:220189/1‑147 (MQ=255) acaGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGTGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGa < 1:249144/147‑1 (MQ=255) acaGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGa < 3:329742/147‑1 (MQ=255) acaGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAgg > 6:272686/1‑149 (MQ=255) caGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGc > 2:41660/1‑122 (MQ=255) caGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGc < 1:41660/122‑1 (MQ=255) aggaggACGCGATGAGCATGACCTTTTGTGGCCAGGAAGCCCTGGTGACCGGCGCGGGTGCCGGCATGGGCCGGGCAACCGCCCTGGCGTTCGCGCACGAGGGCATGAAAGTGGTGGTGGCg < 2:71207/122‑1 (MQ=255) aGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGcc > 1:167918/1‑149 (MQ=255) aGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACCAGGGCATGAAACTGGAGGTGGCg > 1:71207/1‑122 (MQ=255) gAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCgg > 8:152810/1‑55 (MQ=255) aGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCAcc < 2:167918/149‑1 (MQ=255) gCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCg < 5:272686/149‑1 (MQ=255) cACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGt > 2:334597/1‑149 (MQ=255) cgccATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTgg < 5:30975/149‑1 (MQ=255) aGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGa < 5:358664/148‑1 (MQ=255) aTGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAg < 5:361098/129‑1 (MQ=255) aTGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAg > 6:361098/1‑129 (MQ=255) gACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCAcg > 7:327278/1‑149 (MQ=255) cTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCgg < 1:154232/149‑1 (MQ=255) ttCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAg > 6:1920/1‑149 (MQ=255) tAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAgcg < 1:334597/149‑1 (MQ=255) | GCGGTTCCTTAAAATCACTGACAAGCATGGTAGCCCAACCGTTGCTGTGATGATGCTGCCCGGCCGAGTGGTGGCTGACTATGCTCTGAACCCCACCCAATCCCTCACAGGAGCACGCGATGAGCATGACCTTTTCTGGCCAGGTAGCCCTGGTGACCGGCGCGGGTGCCGGCATCGGCCGGGCAACCGCCCTGGCGTTCGCCCACGAGGGCATGAAAGTGGTGGTGGCGGACCTCGACCCGGTCGGCGGCGAGGCCACCGTGGCGCAGATCCACGCGGCAGGCGGCGAAGCG > NC_002947/2042614‑2042906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |