New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2149043 =28 (0.530)3 (0.060) 3/240 NT 9.9% coding (1477/3276 nt) rne ribonuclease E
?NC_002947 2149087 = 28 (0.560)coding (1433/3276 nt) rne ribonuclease E

CCGGTAGCCGCGTTCCTGCTGAACGAAAAGCGTAACTCGATCACCAAGATCGAGCTGCGCACCCGTGCGCGCATCATCATCCTGCCGAACGACCACCTGGAAACCCCGCACTTCGAAGTCCAGCGCCTGCGCGACGACAACCCTGAAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2149193‑2149043
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtgcGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAGCGGTGCGGTCCTTCA  >  NC_002947/2149087‑2149234
                                                                                                                                                                                                                                                                                                           
CCGGTAGCCGCGTTCCTGCTGAACGAAAAGCGTAACTCGATCACCAAGATCGAGCTGCGCACCCGTGCGCGCATCATCATCCTGCCGAACGACCACCTGGAAACCCCGCACTTCGAAGTCCAGCGCCTGCGCGACGACAACCCTGAAG                                                                                                                                                         <  8:109315/148‑1
 CGGTAGCCGCGTTCCTGCTGAACGAAAAGCGTAACTCGATCACCAAGATCGAGCTGCGCACCCGTGCGCGCATCATCATCCTGCCGAACGACCACCTGGAAACCCCGCACTTCGAAGTCCAGCGCCTGCGCGACGACAACCCTGAAGTG                                                                                                                                                       <  1:24645/149‑1
                                                                                                         CCGCACTTCGAAGTCCAGCGCCTGCGCGACGACAACCCTGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTA                                               >  5:38703/1‑149
                                                                                                          CGCACTTCGAAGTCCAGCGCCTGCGCGACGACAACCCTGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTT                                                                     >  3:65542/1‑126
                                                                                                          CGCACTTCGAAGTCCAGCGCCTGCGCGACGACAACCCTGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTT                                                                     <  4:65542/126‑1
                                                                                                                                                     GCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAGCGGTGCGGTCCTTCA  <  8:7754/149‑1
                                                                                                                                                                                                                                                                                                           
CCGGTAGCCGCGTTCCTGCTGAACGAAAAGCGTAACTCGATCACCAAGATCGAGCTGCGCACCCGTGCGCGCATCATCATCCTGCCGAACGACCACCTGGAAACCCCGCACTTCGAAGTCCAGCGCCTGCGCGACGACAACCCTGAAGTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2149193‑2149043
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaagtgcGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAGCGGTGCGGTCCTTCA  >  NC_002947/2149087‑2149234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.