New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2149043 =	28 (0.530)	3 (0.060)	3/240	NT	9.9%	coding (1477/3276 nt)	rne	ribonuclease E
	?	NC_002947	2149087 =	28 (0.560)					coding (1433/3276 nt)	rne	ribonuclease E

CGTCTTCACTGCGGCTTCCTGGCGTACCAGGGTGCGGGTGGCGGTCGGTTGCGGCGCTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAGCGGTGCGGTCCTTCAG  >  NC_002947/2148939‑2149235                                                                                                                                                     |                                                                                                                                                     cgTCTTCACTGCGGCTTCCTTGCGTACCAGGGTGCGGGTGGCGGTCGGTTGCGGCGCTTCTTCGTCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCTCTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCg                                                                                                                                                      <  8:175674/149‑1 (MQ=255)  tagccgcgttcctgctgaacgaaaagcgtaactcgatcaccaagatcgagctgcgcacccgtgcgcgcatcatcatcctgccgaacgaccacctggaaaccccGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCgg                                                                                                                                                     >  5:38703‑M1/104‑149 (MQ=255)             ggCTTCCTGGCGTACCAGGGTGCGGGTGGCGGTCGGTTGCGGCGCTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAggt                                                                                                                                          >  6:320752/1‑149 (MQ=255)              gCTTCCTGGCGTACCAGGGTGCGGGTGGCGGTCGGTTGCGGCGCTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAggtg                                                                                                                                         >  7:233320/1‑149 (MQ=255)                        aaagcgtaactcgatcaccaagatcgagctgcgcacccgtgcgcgcatcatcatcctgccgaacgaccacctggaaaccccGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCg                                                                                                                                                      <  4:65542‑M1/45‑1 (MQ=255)                        aaagcgtaactcgatcaccaagatcgagctgcgcacccgtgcgcgcatcatcatcctgccgaacgaccacctggaaaccccGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCg                                                                                                                                                      >  3:65542‑M1/82‑126 (MQ=255)                                                   gcggcgCTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTgcg                                                                                                     <  2:285712/148‑1 (MQ=255)                                                    cggcgCTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTgcgc                                                                                                    <  5:312187/148‑1 (MQ=255)                                                      gcgcTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCACCCGTGCGCGCatc                                                                                                 <  5:89880/149‑3 (MQ=255)                                                       cgcTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCt                                                                                                <  5:320752/149‑1 (MQ=255)                                                       cgcTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGGTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGGGCGCAGCt                                                                                                <  5:276374/149‑1 (MQ=255)                                                         cttcttCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTc                                                                                               >  4:49738/1‑148 (MQ=255)                                                               cggcttcggcGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGTCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCt                                                                                          <  3:85148/147‑1 (MQ=255)                                                                ggcttcggcGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGGCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTg                                                                                        <  3:119445/148‑1 (MQ=255)                                                                 ggttcggcGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGt                                                                                      <  8:233320/147‑1 (MQ=255)                                                                               gATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCt                                                                        >  7:161079/1‑149 (MQ=255)                                                                                          tGGACTGGTTGTTCCGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTc                                                                    >  7:300189/1‑142 (MQ=255)                                                                                          tGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTc                                                                    <  8:300189/142‑1 (MQ=255)                                                                                               tGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCtt                                                                       <  5:20546/134‑1 (MQ=255)                                                                                               tGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCtt                                                                       >  6:20546/1‑134 (MQ=255)                                                                                                 gttgttCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAAcg                                                      >  4:129628/1‑149 (MQ=255)                                                                                                  ttgttCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAAcgc                                                     <  3:49738/149‑1 (MQ=255)                                                                                                       ccgcacttcgaagtccagcgcctgcgcgacgacaaccctgaagtgcGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTa                                                >  5:38703‑M2/47‑149 (MQ=255)                                                                                                       cAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTc                                                                    >  2:249186/1‑129 (MQ=255)                                                                                                        cgcacttcgaagtccagcgcctgcgcgacgacaaccctgaagtgcGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCttt                                                                      >  3:65542‑M2/46‑126 (MQ=255)                                                                                                        cgcacttcgaagtccagcgcctgcgcgacgacaaccctgaagtgcGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCttt                                                                      <  4:65542‑M2/81‑1 (MQ=255)                                                                                                        aGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCtttt                                                                     >  6:237409/1‑127 (MQ=255)                                                                                                        aGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCtttt                                                                     <  5:237409/127‑1 (MQ=255)                                                                                                          CACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCg                                             <  1:24645‑M1/149‑1 (MQ=255)                                                                                                            CTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCgg                                            <  8:109315‑M1/148‑1 (MQ=255)                                                                                                                aGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCg                                       >  2:201816/1‑149 (MQ=255)                                                                                                                      gtcgtcGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGgatgatgat                                                                                                                    <  8:21607/66‑1 (MQ=255)                                                                                                                      gtcgtcGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGgatgatgat                                                                                                                    >  7:21607/1‑66 (MQ=255)                                                                                                                          tcgCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAg                              >  7:36983/1‑148 (MQ=255)                                                                                                                                    gcTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGtt                                                                 >  6:91642/1‑103 (MQ=255)                                                                                                                                    gcTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCa                   <  7:109315/149‑1 (MQ=255)                                                                                                                                      tGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAgc                 >  1:344672/1‑149 (MQ=255)                                                                                                                                           ttCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCggg                                           <  6:286175/118‑1 (MQ=255)                                                                                                                                           ttCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCggg                                           >  5:286175/1‑118 (MQ=255)                                                                                                                                                   gcGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTT‑GTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAGCGGTGCGGTCCTTCa   <  8:7754‑M2/147‑1 (MQ=255)                                                                                                                                                     ggggTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAGCGGTGCGGTCCTTCAg  >  6:208445/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CGTCTTCACTGCGGCTTCCTGGCGTACCAGGGTGCGGGTGGCGGTCGGTTGCGGCGCTTCTTCGGCTTCGGCGGCGGCGATTTCGTAGCTGGACTGGTTGTTCAGCACTTCAGGGTTGTCGTCGCGCAGGCGCTGGACTTCGAAGTGCGGGGTTTCCAGGTGGTCGTTCGGCAGGATGATGATGCGCGCACGGGTGCGCAGCTCGATCTTGGTGATCGAGTTACGCTTTTCGTTCAGCAGGAACGCGGCTACCGGGATCGGCACTTGAGCACGCACTTCAGCGGTGCGGTCCTTCAG  >  NC_002947/2148939‑2149235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.