| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2426030 = | 74 (1.400) | 4 (0.080) | 4/242 | NT | 5.6% | coding (864/942 nt) | PP_2127 | sensor histidine kinase |
| ? | NC_002947 | 2426062 = | 64 (1.270) | coding (832/942 nt) | PP_2127 | sensor histidine kinase | |||||
AAGGGCTGTCGTTGTCGATCCAGGACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2426181‑2426030‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggcTGCCCTGCAGCGCGATTACCCGCTCCTGCATGCCGGCCAGGCCGCGCTGACCGGCCTCGGCCGGGTGCCGGGCAGGGGCGAAACCACGACCATCGTCCTGGATCGACAACGACAGCCCTTCAGGGGTGCGTTGCAGGCGGATGACCAG > NC_002947/2426062‑2426209 AAGGGCTGTCGTTGTCGATCCAGGACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGTGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGA < 3:35796/149‑1AAGGGCTGTCGTTGTCGATCCAGGACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGA < 5:297678/149‑1 AGGGCTGTCGTTGTCGATCCAGGACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGAG < 1:347378/149‑1 GATCCAGGACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGAG < 3:239694/134‑1 GATCCAGGACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGAG > 4:239694/1‑134 GACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGA > 7:272250/1‑126 GACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGA < 8:272250/126‑1 GGGCAGCCTCGACATCACCAGTCAGCCTGGCCGAGGCTGCCCTGCAGCGCGATTACCCGCTCCTGCATGCCGGCCAGGCCGCGCTGACCGGCCTCGGCCGGGTGCCGGGCAGGGGCGAAACCACGACCATC < 7:298634/131‑1 GGGCAGCCTCGACATCACCAGTCAGCCTGGCCGAGGCTGCCCTGCAGCGCGATTACCCGCTCCTGCATGCCGGCCAGGCCGCGCTGACCGGCCTCGGCCGGGTGCCGGGCAGGGGCGAAACCACGACCATC > 8:298634/1‑131 GCAGCCTCGACATCACCAGTCAGCCTGGCCGAGGCTGCCCTGCAGCGCGATTACCCGCTCCTGCATGCCGGCCAGGCCGCGCTGACCGGCCTCGGCCGGGTGCCGGGCAGGGGCGAAACCACGACCATCGTCCT > 5:260553/1‑134 GCAGCCTCGACATCACCAGTCAGCCTGGCCGAGGCTGCCCTGCAGCGCGATTACCCGCTCCTGCATGCCGGCCAGGCCGCGCTGACCGGCCTCGGCCGGGTGCCGGGCAGGGGCGAAACCACGACCATCGTCCT < 6:260553/134‑1 CTGCCCTGCAGCGCGATTACCCGCTCCTGCATGCCGGCCAGGCCGCGCTGACCGGCCTCGGCCGGGTGCCGGGCAGGGGCGAAACCACGACCATCGTCCTGGATCGACAACGACAGCCCTTCAGGGGTGCGTTGCAGGCGGATGACCAG < 8:81022/149‑1 AAGGGCTGTCGTTGTCGATCCAGGACGATGGTCGTGGTTTCGCCCCTGCCCGGCACCCGGCCGAGGCCGGTCAGCGCGGCCTGGCCGGCATGCAGGAGCGGGTAATCGCGCTGCAGGGCAGCCTCGACATCACCAGTCAGCCTGGCCGAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2426181‑2426030‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggcTGCCCTGCAGCGCGATTACCCGCTCCTGCATGCCGGCCAGGCCGCGCTGACCGGCCTCGGCCGGGTGCCGGGCAGGGGCGAAACCACGACCATCGTCCTGGATCGACAACGACAGCCCTTCAGGGGTGCGTTGCAGGCGGATGACCAG > NC_002947/2426062‑2426209 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |