| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2457316 = | 87 (1.650) | 5 (0.100) | 5/238 | NT | 6.0% | coding (387/999 nt) | PP_2150 | thiamine biosynthesis lipoprotein |
| ? | NC_002947 | 2457378 = | 75 (1.520) | coding (449/999 nt) | PP_2150 | thiamine biosynthesis lipoprotein | |||||
CGCGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCACTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2457471‑2457316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacttgcGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGGTGTCAGCAGTTTTGTCGCCGAGGCCACTGGCGAGCTGAA > NC_002947/2457378‑2457525 CGCGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGG < 2:260015/149‑1CGCGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGG < 2:348225/149‑1 CGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCA > 1:302307/1‑149 AGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGG < 4:323372/144‑1 AGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGG > 3:323372/1‑144 AGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCTCTTGC < 6:224888/143‑1 AGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCGCTTGC > 5:224888/1‑143 TTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCACTTGCTCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGA > 3:179710/1‑149 TTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGAC < 5:272409/116‑1 TTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGAC > 6:272409/1‑116 GCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCG > 5:253161/1‑149 CGCACCTGGGCCAGTGCCTGTGGTTCGGGCACTTGCTCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGGTGTC < 4:179710/149‑1 GCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCAT < 6:51628/114‑1 GCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCT < 3:238577/105‑1 GCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCT > 2:301069/1‑105 GCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCT > 4:238577/1‑105 GCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCT < 1:301069/105‑1 GCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGG < 5:344686/75‑1 GCACTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGG > 6:344686/1‑75 CTTGCGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGGTGTCAGCAGTTTTGTCGCCGAGGCCACTGGCGAGC < 7:239371/149‑1 CGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGGTGTCAGCAGTTTTGTCGCCGAGGCCACTGGCGAGCTGAA < 8:237828/149‑1 CGCGCAGCGATCAAGTCGACAGCATGACCGGCGACGATGCTGTTGAAGTCGAGCTGCACCGGGGCATCCTTGCACAGGGCTCGACCTTTGACGCGCAAGTGCTGGTAACCCACACGCTGGCGCACCTGGGCCAGTGCCTGTGGTTCGGGCACTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2457471‑2457316‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcacttgcGCGTCAAAGGTCGAGCCCTGTGCAAGGATGCCCCGGTGCAGCTCGACTTCAACAGCATCGTCGCCGGTCATGCTGTCGACTTGATCGCTGCGCGCCTGCAGGCCATGGGTGTCAGCAGTTTTGTCGCCGAGGCCACTGGCGAGCTGAA > NC_002947/2457378‑2457525 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |