New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2569069	26 (0.490)	4 (0.080)	4/242	NT	14.1%	coding (479/1050 nt)	PP_2252	hypothetical protein
	?	NC_002947	= 2569108	24 (0.480)					coding (440/1050 nt)	PP_2252	hypothetical protein

GCTGGCGCATGGCTTGCCAGGCCGGCTGCTGGTCCAGTGACTTGGCCCGCAGCAGCTGATACAGGCTGGCATTGCGCGCATCCGGTGGCCCCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTTGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2568917‑2569069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaccTGCAACTGCTCGTCCAGCAACTGCCGGCGATCATCAGCCGGTACAACG  <  NC_002947/2569108‑2569061                                                                                                                                                                                                           GCTGGCGCATGGCTTGCCAGGCCGGCTGCTGGTCCAGTGACTTGGCCCGCAGCAGCTGATACAGGCTGGCATTGCGCGCATCCGGTGGCCCCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTT                                                       >  1:251405/1‑148 GCTGGCGCATGGCTTGCCAGGCCGGCTGCTGGTCCAGTGACTTGGCCCGCAGCAGCTGATACAGGCTGGCATTGCGCGCATCCGGTGGCCCCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTT                                                       <  2:251405/148‑1                                                                 GCTGGCATTGCGCGCATCCGGTGGCCCCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTTGTACCTGCAACTGCTCGTCCAGCAACTGCCGGCGATCATCAGCCGGTACAACG  <  3:198679/137‑1                                                                 GCTGGCATTGCGCGCATCCGGTGGCCCCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTTGTACCTGCAACTGCTCGTCCAGCAACTGCCGGCGATCATCAGCCGGTACAACG  >  4:198679/1‑137                                                                                           CCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTTGTACCTGCAACTGCTCGTCCAGCAACTGCCGGCGATCATCAGCCGGTACAA    <  1:214938/109‑1                                                                                           CCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTTGTACCTGCAACTGCTCGTCCAGCAACTGCCGGCGATCATCAGCCGGTACAA    >  2:214938/1‑109                                                                                                                                                                                                           GCTGGCGCATGGCTTGCCAGGCCGGCTGCTGGTCCAGTGACTTGGCCCGCAGCAGCTGATACAGGCTGGCATTGCGCGCATCCGGTGGCCCCAGGGCGATGGCGGGGATACGGTTGAGGCGCTGGCTGAACTGCTCGGGCGGCGCGTTGTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2568917‑2569069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaccTGCAACTGCTCGTCCAGCAACTGCCGGCGATCATCAGCCGGTACAACG  <  NC_002947/2569108‑2569061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.