| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2688065 | 34 (0.640) | 4 (0.080) | 4/240 | NT | 9.7% | coding (132/462 nt) | PP_2355 | two‑component system response regulator |
| ? | NC_002947 | = 2688121 | 42 (0.840) | coding (76/462 nt) | PP_2355 | two‑component system response regulator | |||||
GGTGAGCATCACGGTGGGGATGCTGCGCAGCTCTGCGGTGGCGCGCACTTCCTTGAGCACTTCCAGGCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2687915‑2688065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagcCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCGCCGCAACGCCTATGCCGAGCGCGATGACGGCAACCCTGCCGTGCTGTTACTCGACCTGAAACTGCCCAAGGTCGACGGCCTGGAA < NC_002947/2688121‑2687975 GGTGAGCATCACGGTGGGGATGCTGCGCAGCTCTGCGGTGGCGCGCACTTCCTTGAGCACTTCCAGGCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCA < 1:240214/149‑1GGTGAGCATCACGGTGGGGATGCTGCGCAGCTCTGCGGTGGCGCGCACTTCCTTGAGCACTTCCAGGCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCA < 2:22271/149‑1 ACTTCCTTGAGCACTTCCAGGCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCAGCCAGTTGGCCAACGAGGTCATCGT‑CTGCGTGACGGCGCCGATGCC > 4:316596/1‑149 AGCACTTCCAGGCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCAGCCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTA > 3:222857/1‑149 CAGGCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCAGCCAGTTGGCCAACGAGGTCATCGT‑CTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCG < 3:316596/149‑1 GCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCAGCCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCGCC < 4:222857/149‑1 CAGCCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCGCCGCAACGCCTATGCCGAGCGCGATGACGGCAACCCTGCCGTGCTGTTACTCGACCTGAAACTGCCCAAGGTCGACGGCCTGG < 8:327002/149‑1 GCCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCGCCGCAACGCCTATGCCGAGCGCGATGACGGCAACCCTGCCGTGCTGTTACTCGACCTGAAACTGCCCAAGGTCGACGGCCTGGAA < 8:85091/149‑1 GCCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCGCCGCAACGCCTATGCCGAGCGCGATGACGGCAACCCTGCCGTGCTGTTACTCGAC < 7:196299/119‑1 GCCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCGCCGCAACGCCTATGCCGAGCGCGATGACGGCAACCCTGCCGTGCTGTTACTCGAC > 8:196299/1‑119 GGTGAGCATCACGGTGGGGATGCTGCGCAGCTCTGCGGTGGCGCGCACTTCCTTGAGCACTTCCAGGCCGTCGACCTTGGGCAGTTTCAGGTCGAGTAACAGCACGGCAGGGTTGCCGTCATCGCGCTCGGCATAGGCGTTGCGGCGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2687915‑2688065‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagcCAGTTGGCCAACGAGGTCATCGTGCTGCGTGACGGCGCCGATGCCCTCGACTACTTGCTGCGCCGCAACGCCTATGCCGAGCGCGATGACGGCAACCCTGCCGTGCTGTTACTCGACCTGAAACTGCCCAAGGTCGACGGCCTGGAA < NC_002947/2688121‑2687975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |