New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 270966852 (0.980)4 (0.080) 4/244 NT 7.4% coding (247/1077 nt) PP_2372 sugar‑binding protein
?NC_002947 = 2709705 50 (0.990)coding (284/1077 nt) PP_2372 sugar‑binding protein

CACCGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2709517‑2709668
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggattTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGCG  <  NC_002947/2709705‑2709562
                                                                                                                                                                                                                                                                                                        
CACCGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCG                                                                                                                                                      <  3:106096/148‑1
   CGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGAT                                                                                                                                                   >  5:84638/1‑148
                                                                                     GAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGC                                                                                                     >  3:4203/1‑112
                                                                                     GAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGC                                                                                                     <  4:4203/112‑1
                                                                                         GCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGT                                                                                                             <  1:136442/100‑1
                                                                                         GCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGT                                                                                                             >  2:136442/1‑100
                                                                                                                                                   GGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTAGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGCG  >  6:256102/1‑149
                                                                                                                                                       TTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGC   <  7:329616/144‑1
                                                                                                                                                       TTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGC   >  8:329616/1‑144
                                                                                                                                                                                                                                                                                                        
CACCGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2709517‑2709668
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggattTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGCG  <  NC_002947/2709705‑2709562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.