New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2709668 | 52 (0.980) | 4 (0.080) | 4/244 | NT | 7.4% | coding (247/1077 nt) | PP_2372 | sugar‑binding protein |
? | NC_002947 | = 2709705 | 50 (0.990) | coding (284/1077 nt) | PP_2372 | sugar‑binding protein |
CACCGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2709517‑2709668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggattTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGCG < NC_002947/2709705‑2709562 CACCGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCG < 3:106096/148‑1 CGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGAT > 5:84638/1‑148 GAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGC > 3:4203/1‑112 GAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGC < 4:4203/112‑1 GCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGT < 1:136442/100‑1 GCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGT > 2:136442/1‑100 GGATTTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTAGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGCG > 6:256102/1‑149 TTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGC < 7:329616/144‑1 TTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGC > 8:329616/1‑144 CACCGAGACATTCTGGACCAGCTATACCCGCTTCATGCAGGCCGCCGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2709517‑2709668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggattTCCGGTGCCACGTACTGCTCGTTGACCAGCACCAGGTAATCCGGCCGCTGCGGCGCGCTCAGGATCGCCCGGGCCTGGGTCAGTGTCAGGTCGGCGCGGCGCTCGCTATATTGCACCTGCAGGGTCATGCCCAGCTCGTCCGCG < NC_002947/2709705‑2709562 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |