New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2709668 | 52 (0.980) | 4 (0.080) | 4/244 | NT | 7.4% | coding (247/1077 nt) | PP_2372 | sugar‑binding protein |
? | NC_002947 | = 2709705 | 50 (0.990) | coding (284/1077 nt) | PP_2372 | sugar‑binding protein |
CGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAACGACGAGCAGGCAG > NC_002947/2709562‑2709851 | cgcgGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCTACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAaatcc > 6:256102‑M2/1‑144 (MQ=255) gcgGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAa > 8:329616‑M2/1‑143 (MQ=255) gcgGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAa < 7:329616‑M2/144‑2 (MQ=255) ggACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTgc < 6:84638/149‑1 (MQ=255) cTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTc < 1:16899/149‑1 (MQ=255) tGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTcg > 5:261090/1‑149 (MQ=255) ggCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTcgcg > 2:307674/1‑149 (MQ=255) gCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCGGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGt > 5:315478/1‑149 (MQ=255) gCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGt < 1:307674/149‑1 (MQ=255) aTGAACCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTgg > 5:318658/1‑149 (MQ=255) gACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGACCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCa > 6:362921/1‑149 (MQ=255) cTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCgg < 5:333353/149‑1 (MQ=255) cAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGt < 2:83938/149‑1 (MQ=255) cAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGt < 6:261090/149‑1 (MQ=255) ttcAATATAGCGATCGCCGCGCCGACCTGACACTGACCGAGGCCCTGGCGATACTGAGCGCGCCGCAGCGGCCGGATTACCTGGTTCTGGTCAACGATCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGTCACCGTGGTGaat < 4:51817/147‑2 (MQ=255) tGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCAGGGTGAAg > 3:152784/1‑149 (MQ=255) tGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTACTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAg > 2:231194/1‑149 (MQ=255) gCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAgc > 7:215159/1‑149 (MQ=255) gCAATATAGCGAGCGACGCGCCGACATGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAgc > 7:209874/1‑149 (MQ=255) aaTATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCGGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAgctg < 6:315478/149‑1 (MQ=255) gcgagcgCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGTGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGctgctgctg < 3:282490/149‑1 (MQ=255) agcgCCGCGCCGACCTGACACTGACCCAGACCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTc < 5:362921/149‑1 (MQ=255) cgccgcgccgACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTcaa < 6:318658/149‑1 (MQ=255) gcgccgACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAAt > 5:20459/1‑149 (MQ=255) cgccgACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATg < 6:20459/149‑1 (MQ=255) gccgACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCAGGGTGAAGCTGCTGCTGGTCAACAATgg < 4:152784/149‑1 (MQ=255) gccgACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTACTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGTGGTGAAGCTGCTGCTGGTCAACAATgg < 1:231194/149‑1 (MQ=255) aCCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCt > 5:17036/1‑148 (MQ=255) aCCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCt < 6:17036/148‑1 (MQ=255) cTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGAc > 1:294504/1‑149 (MQ=255) cacTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGGAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCgcc < 8:209874/149‑1 (MQ=255) cacTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCgcc < 8:215159/149‑1 (MQ=255) acTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCgcca < 2:294504/149‑1 (MQ=255) acTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCgc > 5:167519/1‑147 (MQ=255) aGCGCGCCGTAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGTGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑Gc < 5:124105/147‑1 (MQ=255) gccgcAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGccc > 1:94218/1‑148 (MQ=255) cgcAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGAc < 2:94218/149‑1 (MQ=255) ggCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTAt > 6:103061/1‑149 (MQ=255) gCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAaatccggccgctgcggcgcgctcaggatcgcccgggcctgggtcagtgtcaggtcggcgcggcgctc < 4:4203‑M2/112‑68 (MQ=255) gCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAaatccggccgctgcggcgcgctcaggatcgcccgggcctgggtcagtgtcaggtcggcgcggcgctc > 3:4203‑M2/1‑45 (MQ=255) aTTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAg > 4:10683/1‑149 (MQ=255) aCCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAaatccggccgctgcggcgcgctcaggatcgcccgggcctgggtcagtgtcaggtcggcgcggc > 2:136442‑M2/1‑37 (MQ=255) aCCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAaatccggccgctgcggcgcgctcaggatcgcccgggcctgggtcagtgtcaggtcggcgcggc < 1:136442‑M2/100‑64 (MQ=255) cTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCa > 7:232795/1‑147 (MQ=255) cTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACt < 6:167519/149‑1 (MQ=255) tGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTg > 8:174791/1‑149 (MQ=255) gTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTgg < 3:10683/148‑1 (MQ=255) tGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTAcc > 8:25850/1‑149 (MQ=255) ggTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTgg < 8:246079/143‑1 (MQ=255) ggTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTgg > 7:246079/1‑143 (MQ=255) tCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCtt > 4:132539/1‑148 (MQ=255) cGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTtgatca < 5:103061/149‑3 (MQ=255) gTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAac > 2:100774/1‑148 (MQ=255) cGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAacgac < 7:174791/148‑1 (MQ=255) gCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGCCCGCCAGCCAGCGCCGCAGCATCGAg > 7:155811/1‑93 (MQ=255) gCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAg < 8:155811/93‑1 (MQ=255) aCCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAac > 4:181934/1‑139 (MQ=255) aCCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAac < 3:181934/139‑1 (MQ=255) ggAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAACGACGAgcaggcag < 7:25850/149‑1 (MQ=255) gAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCcagccagc > 3:25865/1‑73 (MQ=255) gAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCcagccagc < 4:25865/73‑1 (MQ=255) gAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGGTAGCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAACGACGAgcaggca < 1:100774/149‑1 (MQ=255) | CGCGGACGAGCTGGGCATGACCCTGCAGGTGCAATATAGCGAGCGCCGCGCCGACCTGACACTGACCCAGGCCCGGGCGATCCTGAGCGCGCCGCAGCGGCCGGATTACCTGGTGCTGGTCAACGAGCAGTACGTGGCACCGGAAATCCTGCGCCTGTCGCGTGGCACCGGGGTGAAGCTGCTGCTGGTCAACAATGGCCTGACCGCCAGCCAGCGCCTCAGCATCGAGG‑‑GCCAGCCCGACAAGTATGCCGAGCCACTGGGTACCTTGATGAGCAACGACGAGCAGGCAG > NC_002947/2709562‑2709851 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |