| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2734846 | 59 (1.120) | 6 (0.120) | 6/238 | NT | 10.0% | coding (1744/4422 nt) | PP_2394 | leucine‑rich repeat‑containing protein |
| ? | NC_002947 | = 2734867 | 53 (1.070) | coding (1765/4422 nt) | PP_2394 | leucine‑rich repeat‑containing protein | |||||
GATGAACAGTGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2734696‑2734846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgaccGGTCGATCTGCGCATCGTCGAGGTCGCTGAATGACCCGCCCAGGCGGCGGAACAACTGGCGTGTGTCGCCCCACTCGGCGGGCTGTTCGCACCACAGCCGCCACGCACCGGCCCCATTGTGACGGAGCGGCGGCGCATAGCCCTGG < NC_002947/2734867‑2734722 GATGAACAGTGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCG < 7:276814/148‑1GATGAACAGTGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCG > 8:276814/1‑148 TGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCGGTCGAT > 4:300336/1‑149 ATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCGGTCGATCTGCG > 6:52256/1‑149 GGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCGGTCGATCTGCGCATCGTCGAGGTCGCT < 5:52256/149‑1 CTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCGGTCGATCTGCGCATCGTCGAGGTCGCTGA < 3:300336/149‑1 GCCGAGTGGGGCGACACACGCCTGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCGGTCGATCTGCGCATCGTCGAGGTCGC < 1:339751/85‑1 GCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCGGTCGATCTGCGCATCGTCGAGGTCGC > 2:339751/1‑85 ACCGGTCGATCTGCGCATCGTCGAGGTCGCTGAATGACCCGCCCAGGCGGCGGAACAACTGGCGTGTGTCGCCCCACTCGGCGGGCTGTTCGCACCACAGCCGCCACGCACCGGCCCCATTGTGACGGAGCGGCGGCGCATAGCCCTGG > 4:2791/1‑149 GATGAACAGTGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2734696‑2734846‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgaccGGTCGATCTGCGCATCGTCGAGGTCGCTGAATGACCCGCCCAGGCGGCGGAACAACTGGCGTGTGTCGCCCCACTCGGCGGGCTGTTCGCACCACAGCCGCCACGCACCGGCCCCATTGTGACGGAGCGGCGGCGCATAGCCCTGG < NC_002947/2734867‑2734722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |