New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 273484659 (1.120)6 (0.120) 6/238 NT 10.0% coding (1744/4422 nt) PP_2394 leucine‑rich repeat‑containing protein
?NC_002947 = 2734867 53 (1.070)coding (1765/4422 nt) PP_2394 leucine‑rich repeat‑containing protein

AACAGTGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTGGTAC  >  NC_002947/2734700‑2734991
                                                                                                                                                  |                                                                                                                                                  
aaCAGTGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCt                                                                                                                                                   <  4:147646/148‑1 (MQ=255)
     tGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCggtcgat                                                                                                                                             >  4:300336‑M1/1‑142 (MQ=255)
     tGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTcgac                                                                                                                                               <  2:242665/147‑1 (MQ=255)
       gCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATg                                                                                                                                           >  6:242072/1‑149 (MQ=255)
          aTTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCggtcgatctgcg                                                                                                                                        >  6:52256‑M1/1‑137 (MQ=255)
            tGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATgcg                                                                                                                                         >  2:12822/1‑146 (MQ=255)
               tCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATgcg                                                                                                                                         >  3:2791/1‑143 (MQ=255)
                cccTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATc                                                                                                                                   >  4:214832/1‑148 (MQ=255)
                 ccTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGa                                                                                                                                 >  8:166473/1‑149 (MQ=255)
                 ccTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGa                                                                                                                                 >  1:193838/1‑149 (MQ=255)
                  cTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGAc                                                                                                                                <  1:12822/149‑1 (MQ=255)
                  cTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGAc                                                                                                                                <  7:166473/149‑1 (MQ=255)
                      ccAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCggt                                                                                                                            >  4:2791‑M2/1‑146 (MQ=255)
                          ggCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCggtcgatctgcgcatcgtcgaggtcgct                                                                                                                        <  5:52256‑M1/149‑29 (MQ=255)
                            cTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCggtcgatctgcgcatcgtcgaggtcgctga                                                                                                                      <  3:300336‑M1/149‑31 (MQ=255)
                            cTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTgg                                                                                                                      <  2:170438/149‑1 (MQ=255)
                               tGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGc                                                                                                                     <  2:193838/147‑1 (MQ=255)
                               tGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGa                                                                                                                   >  1:281723/1‑149 (MQ=255)
                                 cgccgccgcTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGAt                                                                                                                  <  2:281723/148‑1 (MQ=255)
                                     gccgcTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATg                                                                                                             >  6:106326/1‑149 (MQ=255)
                                     gccgcTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATg                                                                                                             >  5:269134/1‑149 (MQ=255)
                                          tCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTg                                                                                                       >  7:189547/1‑149 (MQ=255)
                                              tCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGgat                                                                                                    >  4:161569/1‑148 (MQ=255)
                                               cacaATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGgatga                                                                                                  >  2:180520/1‑149 (MQ=255)
                                                  aaTGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGgatgat                                                                                                 >  5:248291/1‑147 (MQ=255)
                                                  aaTGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGgat                                                                                                    <  6:313955/144‑1 (MQ=255)
                                                  aaTGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGgat                                                                                                    >  5:313955/1‑144 (MQ=255)
                                                           ggTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCg                                                                                      <  5:106326/149‑1 (MQ=255)
                                                              gCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCGTCTGCGggc                                                                                   <  6:248291/149‑1 (MQ=255)
                                                                  ggcggcTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGgatgat                                                                                                 >  5:294947/1‑131 (MQ=255)
                                                                  ggcggcTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGgatgat                                                                                                 <  6:294947/131‑1 (MQ=255)
                                                                   gcggcTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTTGGATGATCAGCATCTGCGggcatgg                                                                               <  1:180520/149‑1 (MQ=255)
                                                                   gcggcTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGggcatgg                                                                               >  3:164048/1‑148 (MQ=255)
                                                                      gcTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGgcatggcatg                                                                           >  8:231766/1‑149 (MQ=255)
                                                                       cTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCAtgt                                                                          <  7:231766/149‑1 (MQ=255)
                                                                           ggtgCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTAt                                                                      <  3:214832/149‑1 (MQ=255)
                                                                            gtgCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCgg                                                                                     <  3:41707/133‑1 (MQ=255)
                                                                            gtgCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCgg                                                                                     >  4:41707/1‑133 (MQ=255)
                                                                              gCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGc                                                                   >  8:88619/1‑149 (MQ=255)
                                                                                 aaCAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGa                                                                >  1:290773/1‑149 (MQ=255)
                                                                                       ccgccgAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGAccgccg                                                          <  4:164048/149‑1 (MQ=255)
                                                                                         gccgAGTGGGGCGACACACGCCTGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCggtcgatctgcgcatcgtcgaggtcgc                                                                                                                         <  1:339751‑M1/85‑28 (MQ=255)
                                                                                         gccgAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCggtcgatctgcgcatcgtcgaggtcgc                                                                                                                         >  2:339751‑M1/1‑58 (MQ=255)
                                                                                         gccgAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGa                                                        <  3:161569/149‑1 (MQ=255)
                                                                                         gccgAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGa                                                        <  5:242072/149‑1 (MQ=255)
                                                                                          ccgAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAg                                                       >  4:337729/1‑149 (MQ=255)
                                                                                             aGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGcc                                                                  <  6:53046/135‑1 (MQ=255)
                                                                                             aGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGcc                                                                  >  5:53046/1‑135 (MQ=255)
                                                                                                 gggCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGc                                                                   <  4:299445/130‑1 (MQ=255)
                                                                                                  ggCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTgg                                                                                                                      <  2:268125/79‑1 (MQ=255)
                                                                                                         cacGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGa                                         >  1:229677/1‑148 (MQ=255)
                                                                                                          acGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGaca                                       >  8:124136/1‑149 (MQ=255)
                                                                                                          acGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGaca                                       >  6:183100/1‑149 (MQ=255)
                                                                                                          acGCCAGTTGTTCCGCCGCCTGGGCGGGCCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCAtgt                                                                          <  3:236712/114‑1 (MQ=255)
                                                                                                          acGCCAGTTGTTCCGCCGCCTGGGCGGGCCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCAtgt                                                                          >  4:236712/1‑114 (MQ=255)
                                                                                                                gttgttCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGc                                                                   >  7:238263/1‑115 (MQ=255)
                                                                                                                gttgttCCGCCGACTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGc                                                                   <  8:238263/115‑1 (MQ=255)
                                                                                                                   gttCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCg                                          >  1:275138/1‑137 (MQ=255)
                                                                                                                   gttCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCg                                          <  2:275138/137‑1 (MQ=255)
                                                                                                                        gccgccTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTg                         >  4:323709/1‑149 (MQ=255)
                                                                                                                           gccTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCgg                      >  3:38304/1‑149 (MQ=255)
                                                                                                                                ggCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGc                 >  3:103319/1‑149 (MQ=255)
                                                                                                                                ggCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGc                 <  4:103319/149‑1 (MQ=255)
                                                                                                                                        aTTCAGCGACCTCGACGATGCGCAGATCGCCCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGGGTATGGCCGCCCGCCGGAGGCCGCGCAGCTCGCCACCGTCCCGCGCGTGCGGCGCGCGGGCAggt         >  4:63674/1‑148 (MQ=255)
                                                                                                                                          tCAGCGACCTCGACGATGCGCAGATCGACCggtcgctgaatgacccgcccaggcggcggaacaactggcgtgtgtcgccccactcggcgggctgttcgcaccacagccgccacgcaccggccccattgtgacggagcggcggcgcatag        <  3:300336‑M2/149‑120 (MQ=255)
                                                                                                                                           cAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGAtt       <  7:124136/148‑1 (MQ=255)
                                                                                                                                           cAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGAtt       <  5:183100/148‑1 (MQ=255)
                                                                                                                                            aGCGACCTCGACGATGCGCAGATCGACCggtcgctgaatgacccgcccaggcggcggaacaactggcgtgtgtcgccccactcggcgggctgttcgcaccacagccgccacgcaccggccccattgtgacggagcggcggcgcatagcc      <  5:52256‑M2/149‑122 (MQ=255)
                                                                                                                                            aGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTgg     <  2:229677/149‑1 (MQ=255)
                                                                                                                                             gCGACCTCGACGATGCGCAGATCGACCggtcgctgaatgacccgcccaggcggcggaacaactggcgtgtgtcgccccactcggc                                                                     >  2:339751‑M2/1‑27 (MQ=255)
                                                                                                                                             gCGACCTCGACGATGCGCAGATCGACCggtcgctgaatgacccgcccaggcggcggaacaacaggcgtgtgtcgccccactcggc                                                                     <  1:339751‑M2/85‑59 (MQ=255)
                                                                                                                                             gCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTGGt    <  6:269134/149‑1 (MQ=255)
                                                                                                                                                aCCggtcgatctgcgcatcgtcgaggtcgctgaatgacccgcccaggcggcggaacaactggcgtgtgtcgccccactcggcgggctgttcgcaccacagccgccacgcaccggccccattgtgacggagcggcggcgcatagccctgg  >  4:2791‑M1/1‑3 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
AACAGTGGCAATTGCTCCCTTACCAGGGCTATGCGCCGCCGCTCCGTCACAATGGGGCCGGTGCGTGGCGGCTGTGGTGCGAACAGCCCGCCGAGTGGGGCGACACACGCCAGTTGTTCCGCCGCCTGGGCGGGTCATTCAGCGACCTCGACGATGCGCAGATCGACCGGTCGCTGGCGATTCATGGCCTGGATGATCAGCATCTGCGGGCATGGCATGTGTATGGCCGACCGCCGGAGGCCGCGCTGCTCGACACCGTCACGCGCGTGCGGCTCGCCGGCAGGATTGGTAC  >  NC_002947/2734700‑2734991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.