| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2955609 | 52 (0.980) | 4 (0.080) | 4/244 | NT | 7.6% | coding (832/843 nt) | PP_2587 | LuxR family transcriptional regulator |
| ? | NC_002947 | = 2955628 | 48 (0.950) | intergenic (+8/‑35) | PP_2587/PP_2588 | LuxR family transcriptional regulator/class III aminotransferase | |||||
GGAGGACACCATCAAGTCGCACCGCAAGAACGTCTACGCCAAGCTCGACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2955464‑2955609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaGCTGGCGTTCAGCGCAGCTTGCCCATGTAGCTTTCCAGCGGGTCCTTGCCCAGCACGCCCTGGGCATTGGCCAGCGCATCGATGAACAGGGAGAACAGTTCGGACTGGGTGCCGATGTCGAGCTTGGCGTAGACGTTCTTGCG < NC_002947/2955628‑2955486 GGAGGACACCATCAAGTCGCACCGCAAGAACGTCTACGCCAAGCTCAACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGG > 7:148980/1‑143GGAGGACACCATCAAGTCGCACCGCAAGAACGTCTACGCCAAGCTCAACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGG < 8:148980/143‑1 CAAGCTCGACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGGGCAGCTGGCGTTCAGCGCAGCTTGCCCATGT < 3:279325/135‑1 CAAGCTCGACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGGGCAGCTGGCGTTCAGCGCAGCTTGCCCATGT > 4:279325/1‑135 GACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGGGCAGCTGGCGTTCAGCGCAGCTTGCCCATGTA < 3:114889/129‑1 GACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGGGCAGCTGGCGTTCAGCGCAGCTTGCCCATGTA > 4:114889/1‑129 AGCTGGCGTTCAGCGCAGCTTGCCCATGTAGCTTTCCAGCGGGTCCTTGCCCAGCACGCCCTGGGCATTGGCCAGCGCATCGATGAACAGGGAGAACAGTTCGGACTGGGTGCCGATGTCGAGCTTGGCGTAGACGTTCTTGCG > 5:159586/1‑144 AGCTGGCGTTCAGCGCAGCTTGCCCATGTAGCTTTCCAGCGGGTCCTTGCCCAGCACGCCCTGGGCATTGGCCAGCGCATCGATGAACAGGGAGAACAGTTCGGACTGGGTGCCGATGTCGAGCTTGGCGTAGACGTTCTTGCG < 6:159586/144‑1 GGAGGACACCATCAAGTCGCACCGCAAGAACGTCTACGCCAAGCTCGACATCGGCACCCAGTCCGAACTGTTCTCCCTGTTCATCGATGCGCTGGCCAATGCCCAGGGCGTGCTGGGCAAGGACCCGCTGGAAAGCTACATGGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2955464‑2955609‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcaGCTGGCGTTCAGCGCAGCTTGCCCATGTAGCTTTCCAGCGGGTCCTTGCCCAGCACGCCCTGGGCATTGGCCAGCGCATCGATGAACAGGGAGAACAGTTCGGACTGGGTGCCGATGTCGAGCTTGGCGTAGACGTTCTTGCG < NC_002947/2955628‑2955486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |