| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3110329 | 49 (0.930) | 4 (0.080) | 4/244 | NT | 7.5% | intergenic (‑149/‑46) | yhdF/PP_2724 | oxidoreductase YhdF/hypothetical protein |
| ? | NC_002947 | = 3110355 | 51 (1.010) | intergenic (‑175/‑20) | yhdF/PP_2724 | oxidoreductase YhdF/hypothetical protein | |||||
GATCTTCGTGCTGAGCGACGAGCGGTTGATGCACCCATTCCCAGTGAATTTTTACCCTCCGCCTAGCTCTACCGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3110250‑3110329‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacgTGGGCCTCACCCATGCCAGCAAGCCCCGTCAGCGGTAGAGCTAGGCGGAGGGTAAAAATTCACTGGGAATGGGTGCATCAACCGCTCGTCGCTCAGCACGAAGATCCACTTCAACACTGGCCTGGCGCGCCTTTCGAACGGGAAT < NC_002947/3110355‑3110211 GATCTTCGTGCTGAGCGACGAGCGGTTGATGCACCCATTCCCAGTGAATTTTTACCCTCCGCCTAGCTCTACCGCTGACGTGGGCCTCACCCATGCCAGCAAGCCCCGTCAGCG > 7:104425/1‑114GATCTTCGTGCTGAGCGACGAGCGGTTGATGCACCCATTCCCAGTGAATTTTTACCCTCCGCCTAGCTCTACCGCTGACGTGGGCCTCACCCATGCCAGCAAGCCCCGTCAGCG < 8:104425/114‑1 TGCACCCATTCCCAGTGAATTTTTACCCTCCGCCTAGCTCTACCGCTGACGTGGGCCTCACCCATGCCAGCAAGCCCCATCAGCGGTAGAGCTAGGCGGA > 3:214463/1‑100 TGCACCCATTCCCAGTGAATTTTTACCCTCCGCCTAGCTCTACCGCTGACGTGGGCCTCACCCATGCCAGCAAGCCCCATCAGCGGTAGAGCTAGGCGGA < 4:214463/100‑1 ACGTGGGCCTCACCCATGCCAGCAAGCCCCGTCAGCGGTAGAGCTAGGCGGAGGGTAAAAATTCACTGGGAATGGGTGCATCAACCGCTCGTCGCTCAGCACGAAGATCCACTTCAACACTGGCCTGGCGCGCCTTTCGAACGGGAAT < 8:34870/148‑1 GATCTTCGTGCTGAGCGACGAGCGGTTGATGCACCCATTCCCAGTGAATTTTTACCCTCCGCCTAGCTCTACCGCTGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3110250‑3110329‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgacgTGGGCCTCACCCATGCCAGCAAGCCCCGTCAGCGGTAGAGCTAGGCGGAGGGTAAAAATTCACTGGGAATGGGTGCATCAACCGCTCGTCGCTCAGCACGAAGATCCACTTCAACACTGGCCTGGCGCGCCTTTCGAACGGGAAT < NC_002947/3110355‑3110211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |