| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3316859 = | 47 (0.890) | 5 (0.100) | 5/244 | NT | 9.8% | intergenic (‑62/+111) | ribC/treSA | riboflavin synthase/trehalose synthase A |
| ? | NC_002947 | 3316895 = | 47 (0.930) | intergenic (‑98/+75) | ribC/treSA | riboflavin synthase/trehalose synthase A | |||||
GCTGTGCCTGCGGATCGTCAACAGCAGCGGGCATGTTTGAATCTGGCGTGGCCATGCCGTCGCAAACCGGTTTCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3317009‑3316859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgcGAGTCTGGCGCCTGCGCGGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTTGCGACGGCATGGCCACGCCAGATTCAAACATGCCCGCTGCTGTTGACGATCCGCAGGCACAGCGCCTCGTACGGGTCCAGGTT > NC_002947/3316895‑3317029 GCTGTGCCTGCGGATCGTCAACAGCAGCGGGCATGTTTGAATCTGGCGTGGCCATGCCGTCGCAAACCGGTTTCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTT > 2:309024/1‑149GCTGTGCCTGCGGATCGTCAACAGCAGCGGGCATGTTTGAATCTGGCGTGGCCATGCCGTCGCAAACCGGTTTCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTT < 7:198838/149‑1 ACAGCAGCGGGCATGTTTGAATCTGGCGTGGCCATGCCGTCGCAAACCGGTTTCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTT < 5:251573/129‑1 ACAGCAGCGGGCATGTTTGAATCTGGCGTGGCCATGCCGTCGCAAACCGGTTTCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTT > 6:251573/1‑129 TCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGC > 5:353079/1‑79 TCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGC < 6:353079/79‑1 CAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGCGAGTCTGGCGCCTGCGCGGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTTGCGACGGCATGGCCACGCCAGATTCAAACATGCCCGCTGCTGTTGACGATCCG > 2:120780/1‑148 TCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGCGAGTCTGGCGCCTGCGCGGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTTGCGACGGCATGGCCACGCCAGATTCAAACATGCCCGCTGCTGTTGACGATCCGCAGGCA > 7:210650/1‑149 GCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGCGAGTCTGGCGCCTGCGCTGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTT < 3:267524/88‑1 GCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGCGAGTCTGGCGCCTGCGCTGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTT > 4:267524/1‑88 AAGCCTGGTCTTGCGAGTCTGGCGCCTGCGCGGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTTGCGACGGCATGGCCACGCCAGATTCAAACATGCCCGCTGCTGTTGACGATCCGCAGGCACAGCGCCTCGTACGGGTCCAGGTT < 8:210650/149‑1 CGAGTCTGGCGCCTGCGCGGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTTGCGACGGCATGGCCACGCCAGATTCAAA < 1:183887/81‑1 CGAGTCTGGCGCCTGCGCGGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTTGCGACGGCATGGCCACGCCAGATTCAAA > 2:183887/1‑81 GCTGTGCCTGCGGATCGTCAACAGCAGCGGGCATGTTTGAATCTGGCGTGGCCATGCCGTCGCAAACCGGTTTCGCCCACAAGCACGCCGCCTGCCCCGCGCAGGCGCCAGACTCGCAAGCCGGCTTGCCAGCCAGGAAGCCTGGTCTTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3317009‑3316859‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttgcGAGTCTGGCGCCTGCGCGGGGCAGGCGGCGTGCTTGTGGGCGAAACCGGTTTGCGACGGCATGGCCACGCCAGATTCAAACATGCCCGCTGCTGTTGACGATCCGCAGGCACAGCGCCTCGTACGGGTCCAGGTT > NC_002947/3316895‑3317029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |