| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3456775 = | 53 (1.000) | 5 (0.100) | 5/244 | NT | 8.0% | coding (514/771 nt) | hbdH | 3‑hydroxybutyrate dehydrogenase |
| ? | NC_002947 | 3456819 = | 64 (1.260) | coding (470/771 nt) | hbdH | 3‑hydroxybutyrate dehydrogenase | |||||
CAAGCATGGCGTGATCGGCCTGACCAAGGTGGTCGGCCTGGAAACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3456824‑3456775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaTGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCAGGCGCGTGCCATGGAATACGGCCGACAGGTTCAGGGC > NC_002947/3456819‑3456964 CAAGCATGGCGTGATCGGCCTGACCAAGGTGGTCGGCCTGGAAACCGCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGC > 7:39982/1‑137CAAGCATGGCGTGATCGGCCTGACCAAGGTGGTCGGCCTGGAAACCGCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGC < 8:39982/137‑1 AAGCATGGCGTGATCGGCCTGACCAAGGTGGTCGGCCTGGAAACCGCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCG > 6:339999/1‑149 AGCATGGCGTGATCGGCCTGACCAAGGTGGTCGGCCTGGAAACCGCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGG > 1:40271/1‑149 GTGATCGGCCTGACCAAGGTGGTCGGCCTGGAAACCGCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCA < 5:339999/149‑1 GCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCAGGCGCGTGCCATGGAATACGGCCGACAGGTT > 1:44268/1‑144 GCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCAGGCGCGTGCCATGGAATACGGCCGACAGGTT < 2:44268/144‑1 GCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCAGGCGCGTGCCATGGAATACGGCC > 5:269880/1‑136 GCCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCAGGCGCGTGCCATGGAATACGGCC < 6:269880/136‑1 CCATGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCAGGCGCGTGCCATGGAATACGGCCGACAGGTTCAGGGC < 7:29393/149‑1 CAAGCATGGCGTGATCGGCCTGACCAAGGTGGTCGGCCTGGAAACCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3456824‑3456775‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccaTGCTTGGCTGCCACGTAGGCTGCCTTGCCAATCGAGCCGACCAGGCCATGCACCGAAGCGATATTGATGATGCGCCCCCAGTTGCGCGTGCGCATGCCCGGCAGCGCCAGGCGCGTGCCATGGAATACGGCCGACAGGTTCAGGGC > NC_002947/3456819‑3456964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |