| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3523486 | NA (NA) | 4 (0.080) | 4/242 | NT | NA | coding (199/1533 nt) | PP_3114 | transposase |
| ? | NC_002947 | = 3523529 | NA (NA) | coding (242/1533 nt) | PP_3114 | transposase | |||||
AAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523333‑3523486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTGGCAACTGTGGTGTCGCCGCATCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGA < NC_002947/3523529‑3523385 AAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACT > 8:285570/1‑149AAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACT > 2:285871/1‑149 AACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCTCTCTTC < 8:15870/149‑1 AACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTC < 4:305976/149‑1 gtTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTC > 5:335349/3‑148 CTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCT > 3:285001/1‑142 CTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCT < 4:285001/142‑1 GCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCGTCGTCAGCC > 6:19825/1‑149 CGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCG < 6:90689/122‑1 CGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCG > 5:90689/1‑122 AGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCGTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTT > 1:267187/1‑149 TCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCGTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAA < 5:19825/149‑1 ATCTAGATGAGGAAGTTGCGCGGTTGCGCCAGCGCTTGTTCGGGCGCATGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCGTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTG < 2:267187/148‑1 TTCGTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTGGCAACTGTGGTGTCGCCGCATCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAAC < 2:216700/129‑1 TTCGTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTGGCAACTGTGGTGTCGCCGCATCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAAC > 1:216700/1‑129 TCGTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTGGCAACTGTGGTGTCGCCGCATCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGA > 6:40002/1‑148 GTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTGGCAACTGTGGTGTCGCCGCATCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGA < 7:301348/139‑1 GTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTGGCAACTGTGGTGTCGCCGCATCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGA > 8:301348/1‑139 AAGCAACTGCTTGAGCAGATGATCCACGAGCGCGCGTCCGACAAGAGCAAGATCGTTCATCTCGAAGAGGAAGTTGCGCTGTTGCGCCAGCGCTTGTTCGGGCGCAAGACCGAGCAGACTGGCGATGCGGCGACACCACAGTTGCCACTCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3523333‑3523486‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgTCGTCAGCCTCATCCAAAGGCTCGGCCAGGCTTTCCGCTTCGTCGAAGAGTGGCAACTGTGGTGTCGCCGCATCGCCAGTCTGCTCGGTCTTGCGCCCGAACAAGCGCTGGCGCAACAGCGCAACTTCCTCTTCGAGATGAACGA < NC_002947/3523529‑3523385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |