| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3608784 | 50 (0.950) | 3 (0.060) | 3/244 | NT | 6.1% | coding (333/2265 nt) | PP_3182 | GGDEF domain‑containing protein |
| ? | NC_002947 | = 3608817 | 45 (0.890) | coding (300/2265 nt) | PP_3182 | GGDEF domain‑containing protein | |||||
CAAAATGTTGTCGATTTCCCGGCCGGTCGAATTGGTCAACGGCAGCAGGAAGGGCAGGCGCCAAGTGGGCAGGGCAGCGGTTTGGCTGACAGGTTTAATGCTTGGCAGGAAAGGTTTGAAACCGTAGCGATCAATGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3608643‑3608784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCGAGTTGCCGGCAGACTGGTTGCGCCAACTGCAGCGGCACATTGATCGCTACGGTTTCAAACCTTTCCTGCCAAGCATTAAACCTGTCAGCCAAACCGCTGCCCTGCCCACTTGGCGCCTGCCCTTCCTGCTGCCGTTGACCAATT < NC_002947/3608817‑3608672 CAAAATGTTGTCGATTTCCCGGCCGGTCGAATTGGTCAACGGCAGCAGGAAGGGCAGGCGCCAAGTGGGCAGGGCAGCGGTTTGGCTGACAGGTTTAATGCTTGGCAGGAAAGGTTTGAAACCGTAGCGATCAATGTGC < 3:300230/139‑1CAAAATGTTGTCGATTTCCCGGCCGGTCGAATTGGTCAACGGCAGCAGGAAGGGCAGGCGCCAAGTGGGCAGGGCAGCGGTTTGGCTGACAGGTTTAATGCTTGGCAGGAAAGGTTTGAAACCGTAGCGATCAATGTGC > 4:300230/1‑139 GAATTGGTCAACGGCAGCAGGAAGGGCAGGCGCCAAGTGGGCAGGGCAGCGGTTTGGCTGACAGGTTTAATGCTTGGCAGGAAAGGTTTGAAACCGTAGCGATCAATGTGCCGCCGAGTTGCCGGCAGACTGGTTGCGCCAACTGCAGC < 5:222286/149‑1 ACGGCAGCAGGAAGGGCAGGCGCCAAGTGGGCAGGGCAGCGGTTTGGCTGACAGGTTTAATGCTTGGCAGGAAAGGTTTGAAACCGTAGCGATCAATGTGCCGCCGAGTTGCCGGCAGACTGGTTGCGCCAACTGCAG < 5:300339/138‑1 ACGGCAGCAGGAAGGGCAGGCGCCAAGTGGGCAGGGCAGCGGTTTGGCTGACAGGTTTAATGCTTGGCAGGAAAGGTTTGAAACCGTAGCGATCAATGTGCCGCCGAGTTGCCGGCAGACTGGTTGCGCCAACTGCAG > 6:300339/1‑138 CGCCGAGTTGCCGGCAGACTGGTTGCTCCAAGTGCAGCGGCTCATTGATCGCTACGGTTTCAAACCTTTCCTGCCAAGCATTAAACCTGTCAGCCAAACCGCTGCCCTGCCCACTTGGCGCGTGGCCTTCGTGCTGGGGTTGAGCAATT < 8:267548/149‑1 CAAAATGTTGTCGATTTCCCGGCCGGTCGAATTGGTCAACGGCAGCAGGAAGGGCAGGCGCCAAGTGGGCAGGGCAGCGGTTTGGCTGACAGGTTTAATGCTTGGCAGGAAAGGTTTGAAACCGTAGCGATCAATGTGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3608643‑3608784‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcCGAGTTGCCGGCAGACTGGTTGCGCCAACTGCAGCGGCACATTGATCGCTACGGTTTCAAACCTTTCCTGCCAAGCATTAAACCTGTCAGCCAAACCGCTGCCCTGCCCACTTGGCGCCTGCCCTTCCTGCTGCCGTTGACCAATT < NC_002947/3608817‑3608672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |