New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3667666	41 (0.780)	4 (0.080)	4/242	NT	9.1%	coding (1021/1368 nt)	PP_3231	hypothetical protein
	?	NC_002947	= 3667696	41 (0.810)					coding (991/1368 nt)	PP_3231	hypothetical protein

AACACATGGCGCAGCTCCTTGCGCTGTGGGTCGCGCCAGTCGCTCAGGCAGGCTGGCACGCCTGCGAGGCGGAACTGATGCTCCCAGCTGTCGCTGCGCGAAGGTCGGATTTCCTTGATCTGCATGTCGCCGTCCCAGTCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3667521‑3667666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcATGGCCACCGACCGCGGCCAGGTGGCCGCCGCCGATGACTGGGACGGCGACATGCAGATCAAGGAAATCCGACCTTCGCGCAGCGACAGCTGGGAGCATCAGTTCCGCCTCGCAGGCGTGCCAGCCTGCCTGAGCGACTGGCGCGACC  <  NC_002947/3667696‑3667549                                                                                                                                                                                                                                                                                                        AACACATGGCGCAGCTCCTTGCGCTGTGGGTCGCGCCAGTCGCTAAGGCAGGCTGGCACGCCTGCGAGGCGGAACTGATGCTCCCAGCTGTCGCTGCGCGAAGGTCGGATTTCCTTGATCTGCATGTCGCCGTCCCAGTCATCGaccgc                                                                                                                                                   >  5:122417/1‑144                                            TCAGGCAGGCTGGCACGCCTGCGAGGCGGAACTGATGCTCCCAGCTGTCGCTGCGCGAAGGTCGGATTTCCTTGATCTGCATGTCGCCGTCCCAGTCATCGGCATGGCCACCGACCGCGGCCAGGTGGCCGCCGCCGATGACT                                                                                                              <  7:125715/143‑1                                            TCAGGCAGGCTGGCACGCCTGCGAGGCGGAACTGATGCTCCCAGCTGTCGCTGCGCGAAGGTCGGATTTCCTTGATCTGCATGTCGCCGTCCCAGTCATCGGCATGGCCACCGACCGCGGCCAGGTGGCCGCCGCCGATGACT                                                                                                              >  8:125715/1‑143                                                                                     CAGCTGTCGCTGCGCGAAGGTCGGATTTCCTTGATCTGCATGTCGCCGTCCCAGTCATCGGCATGGCCACCGACCGCGGCCAGGTGGCCGCCGCCGATG                                                                                                                 >  5:159351/1‑99                                                                                     CAGCTGTCGCTGCGCGAAGGTCGGATTTCCTTGATCTGCATGTCGCCGTCCCAGTCATCGGCATGGCCACCGACCGCGGCCAGGTGGCCGCCGCCGATG                                                                                                                 <  6:159351/99‑1                                                                                                                                                  CATGGCCACCGACCGCGGCCAGGTGGCCGCCGCCGATGACTGGGACGGCGACATGCAGATCAAGGAAATCCGACCTTCGCGCAGCGACAGCTGGGAGCATCAGTTCCGCCTCGCAGGCGTGCCAGCCTGCCTGAGCGACTGGCGCGACC  <  1:190930/149‑1                                                                                                                                                                                                                                                                                                        AACACATGGCGCAGCTCCTTGCGCTGTGGGTCGCGCCAGTCGCTCAGGCAGGCTGGCACGCCTGCGAGGCGGAACTGATGCTCCCAGCTGTCGCTGCGCGAAGGTCGGATTTCCTTGATCTGCATGTCGCCGTCCCAGTCATCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3667521‑3667666 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggcATGGCCACCGACCGCGGCCAGGTGGCCGCCGCCGATGACTGGGACGGCGACATGCAGATCAAGGAAATCCGACCTTCGCGCAGCGACAGCTGGGAGCATCAGTTCCGCCTCGCAGGCGTGCCAGCCTGCCTGAGCGACTGGCGCGACC  <  NC_002947/3667696‑3667549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.