| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3709474 = | 66 (1.250) | 4 (0.080) | 4/238 | NT | 7.3% | coding (923/1077 nt) | paaE | ring 1,2‑phenylacetyl‑CoA epoxidase reductase subunit |
| ? | NC_002947 | 3709526 = | 40 (0.810) | coding (871/1077 nt) | paaE | ring 1,2‑phenylacetyl‑CoA epoxidase reductase subunit | |||||
GTGGATTCGGCGCTTAGCCATATCACCGTGATCAGCGACGGCCGGGCACTGAGCTTCGACCTGCCGCGCAACACCCAGAACGTGCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3709613‑3709474‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgtCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGCCGAATCCACCTGGCGTGCCGCCTCACGGGCTTCGCGGCGGGCCTCGCTGCCGGCGGCGGCGAACA > NC_002947/3709526‑3709669 GTGGATTCGGCGCTTAGCCATATCACCGTGATCAGCGACGGCCGGGCACTGAGCTTCGACCTGCCGCGCAACACCCAGAACGTGCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGG < 3:151975/133‑1GTGGATTCGGCGCTTAGCCATATCACCGTGATCAGCGACGGCCGGGCACTGAGCTTCGACCTGCCGCGCAACACCCAGAACGTGCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGG > 4:151975/1‑133 TCAGCGACGGCCGGGCACTGAGCTTCGACCTGCCGCGCAACACCCAGAACGTGCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGG > 2:256559/1‑106 CCAGAACGTGCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGC > 7:270017/1‑64 CCAGAACGTGCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGC < 8:270017/64‑1 GCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGCGTCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGCCGAATCCACCTGG > 2:62797/1‑149 TGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGCGTCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGC > 3:83687/1‑134 TGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGCGTCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGC < 4:83687/134‑1 GCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGCGTCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGCCGAATCCACCTGGCGTGCCG > 8:289188/1‑149 CGGCGTCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGCCGAATCCACCTGGCGTGCCGCCTCACGGGCTTCGCGGCGGGCCTCGCTGCCGGCGGCGGCGAA > 4:277731/1‑148 GGCGTCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGCCGAATCCACCTGGCGTGCCGCCTCACGGGCTTCGCGGCGGGCCTCGCTGCCGGCGGCGGCGAACA < 3:27935/149‑1 GTGGATTCGGCGCTTAGCCATATCACCGTGATCAGCGACGGCCGGGCACTGAGCTTCGACCTGCCGCGCAACACCCAGAACGTGCTGGACGCCGGCAATGCCATCGGCGCCGAGCTGCCCTACTCGTGCAAGGCCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3709613‑3709474‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcgtCCAGCACGTTCTGGGTGTTGCGCGGCAGGTCGAAGCTCAGTGCCCGGCCGTCGCTGATCACGGTGATATGGCTAAGCGCCGAATCCACCTGGCGTGCCGCCTCACGGGCTTCGCGGCGGGCCTCGCTGCCGGCGGCGGCGAACA > NC_002947/3709526‑3709669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |