| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3732276 = | 50 (0.950) | 4 (0.080) | 4/238 | NT | 8.2% | coding (965/1464 nt) | PP_3299 | lipoprotein |
| ? | NC_002947 | 3732335 = | 43 (0.870) | coding (906/1464 nt) | PP_3299 | lipoprotein | |||||
ACCGCGCCCAGATGGCAATTGCCTCGTCAATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GCGATCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3732429‑3732276‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgatcagGTCGGGCCGACGGCGGAGCAGATCGGAAGGTTTGCCGATTTGCGCAAACGCAGGCACCTGAGGGATTGACGAGGCAATTGCCATCTGGGCGCGGTGGGTACCTGGCGTACTGCCAAGCATGACATCCAAGGCGTTGAGAGCC > NC_002947/3732335‑3732476 ACCGCGCCCAGATGGCAATTGCCTCGTCAATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GC > 3:19127/1‑148 GCGCCCAGATGGCAATTGCCTCGTCAATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GCGATC < 4:19127/149‑1 TCGTCAATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GC < 3:143767/125‑1 TCGTCAATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GC > 4:143767/1‑125 ATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GC > 1:115343/1‑119 ATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GC < 2:115343/119‑1 CTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GCGATCAGGTCGGGCCGACGGCGGAGCGGATCGGAAGGTTTGCCGATTTGCGCAAACGCAGGCACCTGAGGGATTGACGAGGCAATTGCCATCTGGGC > 4:203415/1‑149 TGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GCGATCAGGTCGGGCCGACGGCGGAGCAGATCGGAAGGTTTGCCGATTTGCGCAAACGCAGGCACCTGAGGGATTGACGAGGCAATTGCCATCTGGGCG > 6:73956/1‑149 CTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGTGCGATCAGCGGCGATCAGGTCGGGCCGACGGCGGAGCAGATCGGAAGGTTTGCCGATTTGCGCAAACGCAGGCACCTGAGGGATTGACGAGGCAATTGCCATCTGGGC > 7:123173/1‑149 TGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GCGATCAGGTCGGGCCGACGGCGGAGCGGATCGGAAGGTTTGCCGATTTGCGCAAACGCAGGCACCTGAGGGATTGACGAGGCAATTGCCATCTGGGCGCGGTGGGTAC < 3:203415/149‑1 CGATCAGGTCGGGCCGACGGCGGAGCAGATCGGAAGGTTTGCCGATTTGCGCAAACGCAGGCACCTGAGGGATTGACGAGGCAATTGCCATCTGGGCGCGGTGGGTACCTGGCGTACTGCCAAGCATGACATCCAAGGCGTTGAGAGCC < 4:345060/149‑1 ACCGCGCCCAGATGGCAATTGCCTCGTCAATCCCTCAGGTGCCTGCGTTTGCGCAAATCGGCAAACCTTCCGATCTGCTCCGCCGTCGGCCCGACCTGATCGCCGCTGAGCGCAGGCTCATGGCTGCCAATGCCATGATCGGCAGT‑‑‑‑‑‑‑‑‑‑GCGATCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3732429‑3732276‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgatcagGTCGGGCCGACGGCGGAGCAGATCGGAAGGTTTGCCGATTTGCGCAAACGCAGGCACCTGAGGGATTGACGAGGCAATTGCCATCTGGGCGCGGTGGGTACCTGGCGTACTGCCAAGCATGACATCCAAGGCGTTGAGAGCC > NC_002947/3732335‑3732476 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |