| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4116891 | 45 (0.850) | 4 (0.080) | 3/242 | NT | 8.4% | coding (36/456 nt) | iorA‑II | isoquinoline 1‑oxidoreductase subunit alpha |
| ? | NC_002947 | = 4116933 | 44 (0.870) | coding (78/456 nt) | iorA‑II | isoquinoline 1‑oxidoreductase subunit alpha | |||||
ACCCCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4116739‑4116891‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTGATGCGTAGTTCCATGGTTTCACCTGCCCGTCACGGTTGTTGTCGCTGTGTTTTATCTGCATGGGGAATACGTTGTCCCCCGGT < NC_002947/4116933‑4116787 ACCCCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCA < 1:206166/149‑1 CCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCTGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACGGTGACGGGCAGGTGAAACCATGTAACTACGCATCAACCAGAAGACCTATCAGGT < 1:311567/149‑1 CCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGT > 5:201245/1‑149 CCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACCTATTCCCCATGCACATAAAACACAGCGCCAACAACCGTGACGGGCAGGTGAAACCATGGACCGACGCATCAACCAGAAGACCTATACGGTC > 3:222037/1‑149 GTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTC > 4:81928/1‑149 ACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAG < 3:81928/149‑1 GTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAG > 5:151941/1‑144 GTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAG < 6:151941/144‑1 CAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTG > 3:58028/1‑70 CAGGTCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTG < 4:58028/70‑1 TCATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTGATGCGTAGTTCCATGGTTTCACCTGCCCGTCACGGTTGTTGTCGCTGTGTTTTATCTGCATGGGGAATACGTTGTCCCCCGGT < 8:186878/149‑1 ACCCCCGCCACCAGACCAGCGGTCATCCTCCTGTGCTAGCGTTTCTGCACCGGGGGACAACGTATTCCCCATGCAGATAAAACACAGCGACAACAACCGTGACGGGCAGGTGAAACCATGGAACTACGCATCAACCAGAAGACCTATCAGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4116739‑4116891‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggtcATCGCGGATTACCCACAGCAGGGGCGTGTCGGCGTCCGCCTCGACCTGATAGGTCTTCTGGTTGATGCGTAGTTCCATGGTTTCACCTGCCCGTCACGGTTGTTGTCGCTGTGTTTTATCTGCATGGGGAATACGTTGTCCCCCGGT < NC_002947/4116933‑4116787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |