| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4142506 | 45 (0.850) | 4 (0.080) | 4/244 | NT | 8.0% | coding (639/1482 nt) | PP_3646 | aldehyde dehydrogenase family protein |
| ? | NC_002947 | = 4142532 | 49 (0.970) | coding (665/1482 nt) | PP_3646 | aldehyde dehydrogenase family protein | |||||
CTGCCGGCAACACCATCGTGCTCAAACCGTCCGAGCACGCCTCGGCAACCATCCTCGAGCTGGCCCGACTGGCCCTTGAGGCCGGCTTCCCGGCCGGTGTGGTCAACGTGGTCACCGGCTACGGCCCCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4142373‑4142506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccAGCGGGTGGCGGGTCAGCGCCGCGCCGGTGCTGGGGCCGTAGCCGGTGACCACGTTGACCACACCGGCCGGGAAGCCGGCCTCAAGGGCCAGTCGGGCCAGCTCGAGGATGGTTGCCGAGGCGTGCTCGGACGGTTTGAGCACGATG < NC_002947/4142532‑4142386 CTGCCGGCAACACCATCGTGCTCAAACCGTCCGAGCACGCCTCGGCAACCATCCTCGAGCTGGCCCGACTGGCCCTTGAGGCCGGCTTCCCGGCCGGTGTGGTCAACGTGGTCACCGGCTACGGCCCCAGCACCAGCGGGTGGCGGGT > 1:7134/1‑148 CTCAAACCGTCCGAGCACGCCTCGGCAACCATCCTCGAGCTGGCCCGACTGGCCCTTGAGGCCGGCTTCCCGGCCGGTGTGGTCAACGTGGTCACCGGCTACGGCCCCAGCACCAGCGGGTGGCGGGTCAGCGCCGCGCCGGTGCTGG < 2:7134/148‑1 CCTCGGCAACCATCCTCGAGCTGGCCCGACTGGCCCTTGAGGCCGGCTTCCCGGCCGGTGTGGTCAACGTGGTCACCGGCTACGGCCCCAGCACCAGCGGGTGGCGGGTCAGCGCCGCGCCGGTGCT < 1:95821/127‑1 CCTCGGCAACCATCCTCGAGCTGGCCCGACTGGCCCTTGAGGCCGGCTTCCCGGCCGGTGTGGTCAACGTGGTCACCGGCTACGGCCCCAGCACCAGCGGGTGGCGGGTCAGCGCCGCGCCGGTGCT > 2:95821/1‑127 CCAGCGGGTGGCGGGTCAGCGCCGCGCCGGTGCTGGGGCCGTAGCCGGTGACCACGTTGACCACACCGGCCGGGAAGCCGGCCTCAAGGGCCAGTCGGGCCAGCTCGAGGATGGTTGCCGAGGCGTGCTCGGACGGTTTGAGCAGGATG > 2:314202/1‑149 CTGCCGGCAACACCATCGTGCTCAAACCGTCCGAGCACGCCTCGGCAACCATCCTCGAGCTGGCCCGACTGGCCCTTGAGGCCGGCTTCCCGGCCGGTGTGGTCAACGTGGTCACCGGCTACGGCCCCAGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4142373‑4142506‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaccAGCGGGTGGCGGGTCAGCGCCGCGCCGGTGCTGGGGCCGTAGCCGGTGACCACGTTGACCACACCGGCCGGGAAGCCGGCCTCAAGGGCCAGTCGGGCCAGCTCGAGGATGGTTGCCGAGGCGTGCTCGGACGGTTTGAGCACGATG < NC_002947/4142532‑4142386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |