New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 435294844 (0.830)6 (0.120) 6/240 NT 12.3% coding (74/1086 nt) yrpB 2‑nitropropane dioxygenase
?NC_002947 = 4352964 44 (0.880)coding (90/1086 nt) yrpB 2‑nitropropane dioxygenase

GACATCCAGGTCAGCAAGGCCCTGTAAGACTCGCCGCAAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4352797‑4352948
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatggcCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTTGCGGCGAGTCTTACAG  <  NC_002947/4352964‑4352818
                                                                                                                                                                                                                                                                                                           
GACATCCAGGTCAGCAAGGCCCTGTAAGACTCGCCGCAAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCAT                                                                                                                                                        <  7:40161/149‑1
                           GACTCGCCGCAAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGGG                                                                                                                             >  8:114380/1‑149
                                     AAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGGGTGCCT                                                                                                                        >  7:29923/1‑144
                                     AAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGGGTGCCT                                                                                                                        <  8:29923/144‑1
                                                                     GAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCGCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGG                                                                                                                              >  7:224617/1‑106
                                                                     GAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGCCGAGCCGGTCGCCCCCGCCATGG                                                                                                                              <  8:224617/106‑1
                                                                                                                                 CCCATTCTGCAGGCACCCATGGCGGGGGCGACCGGCTCGGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGG                       >  7:114380/1‑149
                                                                                                                                                  CATGGCCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTTGCGGCGAGTCT       >  6:42149/1‑148
                                                                                                                                                      GCCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTTGCGGCGAGTCTTACAG  >  8:190702/1‑149
                                                                                                                                                                                                                                                                                                           
GACATCCAGGTCAGCAAGGCCCTGTAAGACTCGCCGCAAGCCCCCGCCGCAGCGCTCGCCCCACGCAAGGAGAATCGCATGAGCCATTGGCCCGACCGCCGTATCCTCAACCTGCTGGGCATCGAGCTGCCCATTCTGCAGGCACCCATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4352797‑4352948
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccatggcCGAGCCGGTCGCCCCCGCCATGGGTGCCTGCAGAATGGGCAGCTCGATGCCCAGCAGGTTGAGGATACGGCGGTCGGGCCAATGGCTCATGCGATTCTCCTTGCGTGGGGCGAGCGCTGCGGCGGGGGCTTGCGGCGAGTCTTACAG  <  NC_002947/4352964‑4352818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.