New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5184954 | 59 (1.120) | 3 (0.060) | 3/244 | NT | 5.3% | coding (1506/1716 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase |
? | NC_002947 | = 5184980 | 50 (0.990) | coding (1480/1716 nt) | aceK | isocitrate dehydrogenase kinase/phosphatase |
CCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5184840‑5184954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acattCCGCCACCGCGTTACCCGGAGGACGAAATGTCGGGCGAGCCGTGGTACTCGATCGGGCCGCATGATGTGTTCCCCGAAGAGTTTCCGCCGTTTCTGTTTGCCGATATGGGCCAGCGGCGGTTGTTCAGCCGCTTGCATGGGGAACT < NC_002947/5184980‑5184835 CCCATGCAAGCGGCTGAACAAACGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTCCGCCACCGCGTTACCCGGAGGACGAAATGTCG < 3:178308/148‑1 TGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTCCGCCACCGCGTTACCCGGAGGACGAAATGTCGG < 7:24721/135‑1 TGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTCCGCCACCGCGTTACCCGGAGGACGAAATGTCGG > 8:24721/1‑135 ACATTCCGCCACCGCGTTACCCGGAGGACGAAATGTCGGGCGAGCCGTGGTACTCGATCGGGCCGCATGATGTGTTCCCCGAAGAGTTTCCGCCGTTTCTGTTTGCCGATATGGGCCAGCGGCGGTTGTTCAGCCGCTTGCATGGGGAA < 6:234344/149‑1 ACATTCCGCCACCGCGTTACCCGGAGGACGAAATGTCGGGCGAGCCGTGGTACTCGATCGGGCCGCATGATGTGTTCCCCGAAGAGTTTCCGCCGTTTCTGTTTGCCGATATGGGCCAGCGGCGGTTGTTCAGCCGCTTGCATGGGGA > 5:80210/1‑148 ATTCCGCCACCGCGTTACCCGGAGGACGAAATGTCGGGCGAGCCGTGGTACTCGATCGGGCCGCATGATGTGTTCCCCGAAGAGTTTCCGCCGTTTCTGTTTGCCGATATGGGCCAGCGGCGGTTGTTCAGCCGCTTGCATGGGGAACT > 5:83701/1‑149 ATTCCGCCACCGCGTTACCCGGAGGACGAAATGTCGGGCGAGCCGTGGTACTCGATCGGGCCGCATGATGTGTTCCCCGAAGAGTTTCCGCCGTTTCTGTTTGCCGATATGGGCCAGCGGCGGTTGTTCAGCCGCTTGCATGGGGAACT < 6:83701/149‑1 CCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5184840‑5184954 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acattCCGCCACCGCGTTACCCGGAGGACGAAATGTCGGGCGAGCCGTGGTACTCGATCGGGCCGCATGATGTGTTCCCCGAAGAGTTTCCGCCGTTTCTGTTTGCCGATATGGGCCAGCGGCGGTTGTTCAGCCGCTTGCATGGGGAACT < NC_002947/5184980‑5184835 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |