New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5184954	59 (1.120)	3 (0.060)	3/244	NT	5.3%	coding (1506/1716 nt)	aceK	isocitrate dehydrogenase kinase/phosphatase
	?	NC_002947	= 5184980	50 (0.990)					coding (1480/1716 nt)	aceK	isocitrate dehydrogenase kinase/phosphatase

AGTTCCCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGTTCGCCGCCGCCAACTGCTTGATGGCCAGGC  >  NC_002947/5184835‑5185126                                                                                                                                                  |                                                                                                                                                     aGTTCCCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGaat                                                                                                                                                   >  5:83701‑M2/1‑146 (MQ=255) aGTTCCCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGaat                                                                                                                                                   <  6:83701‑M2/149‑4 (MQ=255)   ttCCCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGaatgt                                                                                                                                                 <  6:234344‑M2/149‑6 (MQ=255)    tCCCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGaatgt                                                                                                                                                 >  5:80210‑M2/1‑143 (MQ=255)      cccATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTgg                                                                                                                                               <  3:64779/148‑1 (MQ=255)       ccATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCg                                                                                                                                             >  5:126360/1‑149 (MQ=255)       ccATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCg                                                                                                                                             >  3:276363/1‑149 (MQ=255)                  gCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCt                                                                                                                                  >  6:353417/1‑149 (MQ=255)                   cTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTc                                                                                                                                 >  4:171388/1‑149 (MQ=255)                      aacaacCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGt                                                                                                                              >  7:203545/1‑149 (MQ=255)                      aacaacCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATCCGACCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGt                                                                                                                              >  1:279103/1‑149 (MQ=255)                       acaacCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGt                                                                                                                              >  8:48647/1‑148 (MQ=255)                         aacCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAg                                                                                                                           >  2:104814/1‑149 (MQ=255)                          acCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAg                                                                                                                           >  7:65946/1‑148 (MQ=255)                              ccgcTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGc                                                                                                                     <  8:203545/149‑1 (MQ=255)                                 cTGGCCCATATCGGCAAACAGAAACGGCTGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGa                                                                                                                  <  5:234344/149‑1 (MQ=255)                                 cTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGa                                                                                                                  <  6:126360/149‑1 (MQ=255)                                    gCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAg                                                                                                                      <  7:324386/142‑1 (MQ=255)                                    gCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAg                                                                                                                      >  8:324386/1‑142 (MQ=255)                                     cccATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTc                                                                                                              <  8:65946/149‑1 (MQ=255)                                     cccATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTc                                                                                                              <  4:276363/149‑1 (MQ=255)                                        atatCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGt                                                                                                                              <  2:308012/131‑1 (MQ=255)                                           tCGGCAAACAGAAACGGCGGAAACTCATCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCa                                                                                                          >  1:4988/1‑147 (MQ=255)                                             ggCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGt                                                                                                      >  4:180428/1‑149 (MQ=255)                                                    aGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGt                                                                                                            >  8:205467/1‑136 (MQ=255)                                                    aGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGt                                                                                                            <  7:205467/136‑1 (MQ=255)                                                         cggcggAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑a                                                                                         <  2:70073/149‑1 (MQ=255)                                                               aaaCTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAg                                                                                                       <  7:233285/130‑1 (MQ=255)                                                               aaaCTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAg                                                                                                       >  8:233285/1‑130 (MQ=255)                                                                     ttCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCa                                                                                                          >  7:145098/1‑121 (MQ=255)                                                                     ttCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCa                                                                                                          <  8:145098/121‑1 (MQ=255)                                                                           gAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTa                                                                                                  <  8:264396/123‑1 (MQ=255)                                                                           gAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTa                                                                                                  >  7:264396/1‑123 (MQ=255)                                                                           gAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTca                                                                       >  8:127683/1‑149 (MQ=255)                                                                              cacaTCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCgg                                                                                                                                            >  4:207356/1‑79 (MQ=255)                                                                              cacaTCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCgg                                                                                                                                            <  3:207356/79‑1 (MQ=255)                                                                                        ggCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTGCGGGTAAGGCGGTGGCGGAATGTGGCGGAAATTCACGTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGttctt                                                          <  4:157925/149‑1 (MQ=255)                                                                                        ggCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGttctt                                                          <  8:41873/149‑1 (MQ=255)                                                                                         gCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAGAGAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGttctt                                                          <  1:104814/149‑1 (MQ=255)                                                                                          cccGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCa                                                        <  7:48647/149‑1 (MQ=255)                                                                                          ccagATCGAGTACCACGGATAGCCCGACATTTCGTACTCCGGGTAACGCGGTGGCTGAATGTGGCGGAAATTCACCTCGGTAAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACAAGGCCATGACGCGTCACACCAAATttctt                                                          >  8:185221/4‑147 (MQ=255)                                                                                             gATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCa                                                        <  8:318040/146‑1 (MQ=255)                                                                                             gATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCa                                                        >  7:318040/1‑146 (MQ=255)                                                                                              aTCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCaa                                                    <  3:180428/149‑1 (MQ=255)                                                                                                   gTACCACGGCTCGCCCGACATTTCGTCCTCCGTGTAACGCGGTGGCGTAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTTATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAAc                                                   <  7:185221/145‑1 (MQ=255)                                                                                                          ggCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCggg                                        <  5:353417/149‑1 (MQ=255)                                                                                                           gCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCgggg                                       <  7:127683/149‑1 (MQ=255)                                                                                                               gCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAg                                    <  2:279103/148‑1 (MQ=255)                                                                                                                 ccGACATTTCGTCCTCCGGGTAACGCGGTGGCGGaatgtcgggcgagccgtggtactcgatcgggccgcatgatgtgttccccgaagagtttccgccgtttctgtttgccgatatgggccagcggcggttgttca                                                 <  7:24721‑M2/135‑102 (MQ=255)                                                                                                                 ccGACATTTCGTCCTCCGGGTAACGCGGTGGCGGaatgtcgggcgagccgtggtactcgatcgggccgcatgatgtgttccccgaagagtttccgccgtttctgtttgccgatatgggccagcggcggttgttca                                                 >  8:24721‑M2/1‑34 (MQ=255)                                                                                                                  cGACATTTCGTCCTCCGGGTAACGCGGTGGCGGaatgtcgggcgagccgtggtactcgatcgggccgcatgatgtgttccccgaagagtttccgccgtttctgtttgccgatatgggccagcggcgtttgttcagccgcttgcatggg                                   <  3:178308‑M2/148‑116 (MQ=255)                                                                                                                   gACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGttctt                                                          >  4:98641/1‑122 (MQ=255)                                                                                                                   gACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGttctt                                                          <  3:98641/122‑1 (MQ=255)                                                                                                                   gACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCgg                                         >  7:24279/1‑139 (MQ=255)                                                                                                                   gACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCgg                                         <  8:24279/139‑1 (MQ=255)                                                                                                                       tttCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGTTcgcc                           <  6:295091/149‑1 (MQ=255)                                                                                                                       tttCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGTTcgcc                           >  5:295091/1‑149 (MQ=255)                                                                                                                        ttCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGt                                <  2:271936/143‑1 (MQ=255)                                                                                                                        ttCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGt                                >  1:271936/1‑143 (MQ=255)                                                                                                                           gTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGTTcgccgccg                       >  3:131090/1‑149 (MQ=255)                                                                                                                              ctccGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCaaa                                                                <  8:20270/105‑1 (MQ=255)                                                                                                                              ctccGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCaaa                                                                >  7:20270/1‑105 (MQ=255)                                                                                                                                              ggCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCgg                                         >  7:238715/1‑112 (MQ=255)                                                                                                                                              ggCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCgg                                         <  8:238715/112‑1 (MQ=255)                                                                                                                                                cGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGTTCGACGCCGCCAACTGCTTGATTGACAGGc  >  5:335625/1‑149 (MQ=255)                                                                                                                                                 ggAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACGAACGCGGCCATGACGGGTCCCACCAAAGTTATTCACCAACATTTCCCCCGGGAACATGTTCGCCGCCGCCAACTCCTTTATGGCCAGGc  >  1:274497/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                     AGTTCCCCATGCAAGCGGCTGAACAACCGCCGCTGGCCCATATCGGCAAACAGAAACGGCGGAAACTCTTCGGGGAACACATCATGCGGCCCGATCGAGTACCACGGCTCGCCCGACATTTCGTCCTCCGGGTAACGCGGTGGCGGAATGTGGCGGAAATTCACCTCGGTCAG‑GAAGCTGATTTCGTCATAGTCGTAGAACACG‑ACCCGGCCATGACGGGTCACACCAAAGTTCTTCAGCAACATGTCGCCGGGGAAGATGTTCGCCGCCGCCAACTGCTTGATGGCCAGGC  >  NC_002947/5184835‑5185126

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.