New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 521169044 (0.830)3 (0.060) 3/238 NT 6.3% coding (260/1638 nt) PP_4592 metal dependent hydrolase
?NC_002947 = 5211711 48 (0.970)coding (239/1638 nt) PP_4592 metal dependent hydrolase

CGCCTTCCACAGCAGCACCGATGGCAGCACACCCAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5211539‑5211690
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcatgaGTGGCGCGGGCGTGGCTTACTTCATGAACCAGTACGGCGTACTTATTGACGCCGGCATGTTCCGTAATATGGCCGAGACCAATATTGCGGAGGTGCGCGACTTGATGTCGTTCAAGTTTGCCGCGTATATCCTGCTGCTGGGTGTGC  <  NC_002947/5211711‑5211565
                                                                                                                                                                                                                                                                                                           
CGCCTTCCACAGCAGCACCGATGGCAGCACACCCAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTC                                                                                                                                                         <  3:226258/148‑1
   CTTCCACAGCAGCACCGATGGCAGCACACCCAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGA                                                                                                                                                     >  5:108113/1‑149
                                     AGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAGTGGCGCGGGCGTGGCTTACTTCATGAACCAGTA                                                                                                                   <  6:108113/149‑1
                                       CAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAGTGGCGCGGGCGTGGCTTACTTCATGAACCA                                                                                                                      >  5:296757/1‑144
                                       CAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGAGTGGCGCGGGCGTGGCTTACTTCATGAACCA                                                                                                                      <  6:296757/144‑1
                                                                                                                                                 TTCATGAGTGGCGCGGGCGTGGCTTACTTCATGAACCAGTACGGCGTACTTATTGACGCCGGCATGTTCCGTAATATGGCCGAGACCAATATTGCGGAGGTGCGCGACTTGATGTCGTTCAAGTTTGCCGCGTATATCCTGCTGCTGG        <  5:72803/148‑1
                                                                                                                                                   CATGAGTGGCGCGGCCGTGGCTTACTTCATGAACCAGTACGGCGTACTTATTGACGCCGGCATGTTCCGTAATATGGCCGAGACCAATATTGCGTAGGTTCGCGACTTGATGTCGTTCAAtt                                <  5:304146/122‑3
                                                                                                                                                      GAGTGGCGCGGGCGTGGCTTACTTCATGAACCAGTACGGCGTACTTATTGACGCCGGCATGTTCCGTAATATGGCCGAGACCAATATTGCGGAGGTGCGCGACTTGATGTCGTTCAAGTTTGCCG                          <  2:8063/125‑1
                                                                                                                                                       AGTGGCGCGGGCGTGGCTTACTTCATGAACCAGTACGGCGTACTTATTGACGCCGGCATGTTCCGTAATATGGCCGAGACCAATATTGCGGAGGTGCGCGACTTGATGTCGTTCAAGTTTGCCGCGTATATCCTGCTGCTGGGTGTGC  <  4:157941/148‑1
                                                                                                                                                                                                                                                                                                           
CGCCTTCCACAGCAGCACCGATGGCAGCACACCCAGCAGCAGGATATACGCGGCAAACTTGAACGACATCAAGTCGCGCACCTCCGCAATATTGGTCTCGGCCATATTACGGAACATGCCGGCGTCAATAAGTACGCCGTACTGGTTCATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5211539‑5211690
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcatgaGTGGCGCGGGCGTGGCTTACTTCATGAACCAGTACGGCGTACTTATTGACGCCGGCATGTTCCGTAATATGGCCGAGACCAATATTGCGGAGGTGCGCGACTTGATGTCGTTCAAGTTTGCCGCGTATATCCTGCTGCTGGGTGTGC  <  NC_002947/5211711‑5211565

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.