| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5501667 = | 49 (0.930) | 3 (0.060) | 3/246 | NT | 5.6% | coding (60/390 nt) | PP_4835 | hypothetical protein |
| ? | NC_002947 | 5501707 = | 53 (1.040) | coding (100/390 nt) | PP_4835 | hypothetical protein | |||||
GCCGACGCTGTCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501817‑5501667‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGAGCAGCTGCTGTGGGGGGCTTTCTGTTCCAGCATGGCCAACAAGGCCAACGTCGACGTTCAG > NC_002947/5501707‑5501769 GCCGACGCTGTCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGG > 7:64584/1‑149 CCGACGCTGTCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGC < 5:49738/149‑1 ACGCTGTCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGC > 7:297141/1‑146 ACGCTGTCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGC < 8:297141/146‑1 TCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATG > 3:165016/1‑138 TCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATG < 4:165016/138‑1 CCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGCCGAGCAGCTGCTGTGGGGGGCTTTCTGTTCCAGCATGGCCAACAAGGCCAACGTCGACGTTCAG > 7:134540/1‑119 CCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGCCGAGCAGCTGCTGTGGGGGGCTTTCTGTTCCAGCATGGCCAACAAGGCCAACGTCGACGTTCAG < 8:134540/119‑1 CAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGCCGAGCAGCTGCTGTGGGGGGCTTTCTGTTCCAGCATGGCCAACAAGGCCAACGTCGACGTT < 4:253278/112‑1 GCCGACGCTGTCGTCACTTTGCGGGCCGAGGTCGATCTTGGCCAGGGCCTGAACGTCGACGTTGGCCTTGTTGGCCATGCTGGAACAGAAAGCCCCCCACAGCAGCTGCTCGGCCGTGCCCTTGGGCGCAGCAGAAGACAGCGGCATGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5501817‑5501667‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccGAGCAGCTGCTGTGGGGGGCTTTCTGTTCCAGCATGGCCAACAAGGCCAACGTCGACGTTCAG > NC_002947/5501707‑5501769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |