New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5630781 =	49 (0.930)	5 (0.100)	4/244	NT	9.5%	coding (311/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase
	?	NC_002947	5630838 =	48 (0.950)					coding (368/3954 nt)	putA	proline dehydrogenase/1‑pyrroline‑5‑carboxylate dehydrogenase

CGAGAATTCCTGCAGCAGGCCCTGGACGATACCGGCACGGCCGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5630932‑5630781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAGGAATTCTCGCTGTCGTCTCAGGAAGGCGTGGCGCTGATGTGCCTGGCCGAAGCCCTGCTGCG  >  NC_002947/5630838‑5630985                                                                                                                                                                                                                                                                                                              CGAGAATTCCTGCAGCAGGCCCTGGACGATACCGGCATGGCCGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGAGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCA                                                                                                                                                         >  1:169159/1‑149  GAGAATTCCTGCAGCAGGCCCTGGACGATACCGGCACGGCCGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCAC                                                                                                                                                        <  1:205686/149‑1                                                                 AGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCAC                                                                                                                                                        <  2:272108/86‑1                                                                 AGTTTTTCGGCAATGCTTCCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCAC                                                                                                                                                        >  1:272108/1‑86                                                                                            TTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCAACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAGG                                                               >  1:309174/1‑148                                                                                            TTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCAACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAG                                                                >  5:2640/1‑147                                                                                            TTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCAACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAG                                                                <  6:2640/147‑1                                                                                              GTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCAACAAGCTGGCCGCAAGCATTGCCGAAAAACT                                                                                                                       <  3:175860/90‑1                                                                                              GTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCAACAAGCTGGCCGCAAGCATTGCCGAAAAACT                                                                                                                       >  4:175860/1‑90                                                                                                                                                    CACCAACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAGGAATTCTCGCTGTCGTCTCAGGAAGGCGTGGCGCTGATGTGCCTGGCCGAAGCCCTGC      <  1:131962/149‑1                                                                                                                                                       CAACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAGGAATTCTCGCTGTCGTCTCAGGAAGGCGTGGCGCTGATGTGCCTGGCCGAAGCCCTGCTGC   <  5:131434/149‑1                                                                                                                                                       CAACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAGGAATTCTCGCTGTCGTCTCAGGAAGGCGTGGCGCTGATGTGCCTGGCCGAAGCCCTGCTGC   >  5:232297/1‑149                                                                                                                                                        AACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAGGAATTCTCGCTGTCGTCTCAGGAAGGCGTGGCGCTGATGTGCCTGGCCGAAGCCCTGCTGCG  >  7:14366/1‑149                                                                                                                                                                                                                                                                                                              CGAGAATTCCTGCAGCAGGCCCTGGACGATACCGGCACGGCCGCCGACGCTTTTCTGGTTGCGCAGTTTTTCGGCAATGCTTGCGGCCAGCTTGTTGGTGGCGTCGGCCAGCGGCGCGCTCAGGCGCGCCTGCTCCAGCAGCATCGGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5630932‑5630781 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caccaACAAGCTGGCCGCAAGCATTGCCGAAAAACTGCGCAACCAGAAAAGCGTCGGCGGCCGTGCCGGTATCGTCCAGGGCCTGCTGCAGGAATTCTCGCTGTCGTCTCAGGAAGGCGTGGCGCTGATGTGCCTGGCCGAAGCCCTGCTGCG  >  NC_002947/5630838‑5630985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.