New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5654720 =	47 (0.890)	4 (0.080)	3/246	NT	7.1%	coding (826/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase
	?	NC_002947	5654765 =	59 (1.150)					coding (781/1059 nt)	epd	D‑erythrose 4‑phosphate dehydrogenase

CGGAACTTGCCGGGCGAATCCAGGCCAAAGCGGTACGTGTACCGACCGTCAACGTCTCGTGCCTGGACATCACCCTGCAGACTGCCCGCGACACCAGTGCGGCCGAAGTCAACCGAGTGCTGCGCGAGGCTGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5654857‑5654720 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggTGTCGCGGGCAGTCTGCAGGGTGATGTCCAGGCACGAGACGTTGACGGTCGGTACACGTACCGCTTTGGCCTGGATTCGCCCGGCAAGTTCCGGAAGCAGGCGCT  >  NC_002947/5654765‑5654869                                                                                                                                                                                                                                                     CGGAACTTGCCGGGCGAATCCAGGCCAAAGCGGTACGTGTACCGACCGTCAACGTCTCGTGCCTGGACATCACCCTGCAGACTGCCCGCGACACCAGTGCGGCCGAAGTCAACCGAGTGCTGCGAGAGGCTGCGCT                                                                                                             >  6:246096/1‑136                                                                                            CACCAGTGCGGCCGAAGTCAACCGAGTGCTGCGCGAGGCTGCGCTGGTGTCGCGGGCAGTCTGCAGGGTGATGTCCAGGCACGAGACGTTGACGGTCGGTACACGTACCGCTTTGGCCTGGATTCGCCCGGCAAGTTCCGGAAGCAGGC     >  5:78580/1‑149                                                                                               CAGTGCGGCCGAAGTCAACCGAGTGCTGCGCGAGGCTGCGCTGGTGTCGCGGGCAGTCTGCAGGGTGATGTCCAGGTACGAGACGTTGACGGTCGGTACACGTACCGCTTTGGCCTGGATTCGCCCGGCAAGTTCCGGAAGCAGGCGCT  >  4:179955/1‑149                                                                                               CAGTGCGGCCGAAGTCAACCGAGTGCTGCGCGAGGCTGCGCTGGTGTCGCGGGCAGTCTGCAGGGTGATGTCCAGGCACGAGACGTTGACGGTCGGTACACGTACCGCTTTGGCCTGGATTCGCCCGGCAAGTTCCGGAAGCAG       <  5:69498/144‑1                                                                                               CAGTGCGGCCGAAGTCAACCGAGTGCTGCGCGAGGCTGCGCTGGTGTCGCGGGCAGTCTGCAGGGTGATGTCCAGGCACGAGACGTTGACGGTCGGTACACGTACCGCTTTGGCCTGGATTCGCCCGGCAAGTTCCGGAAGCAG       >  6:69498/1‑144                                                                                                                                                                                                                                                     CGGAACTTGCCGGGCGAATCCAGGCCAAAGCGGTACGTGTACCGACCGTCAACGTCTCGTGCCTGGACATCACCCTGCAGACTGCCCGCGACACCAGTGCGGCCGAAGTCAACCGAGTGCTGCGCGAGGCTGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5654857‑5654720 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggTGTCGCGGGCAGTCTGCAGGGTGATGTCCAGGCACGAGACGTTGACGGTCGGTACACGTACCGCTTTGGCCTGGATTCGCCCGGCAAGTTCCGGAAGCAGGCGCT  >  NC_002947/5654765‑5654869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.