New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5661040	43 (0.810)	4 (0.080)	4/234	NT	8.5%	coding (665/1701 nt)	ligB	DNA ligase B
	?	NC_002947	= 5661069	46 (0.950)					coding (694/1701 nt)	ligB	DNA ligase B

CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5660883‑5661040 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAG  <  NC_002947/5661069‑5660928                                                                                                                                                                                                                                                                                                              CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTAT                                                                                                                                                         <  1:64582/149‑1   CGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCG                                                                                                                                                       <  2:169855/149‑1                                                 GACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCG                                                                                                          <  4:44231/148‑1                                                   CGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATA                                                                                                       <  6:278117/149‑1                                                                                  AACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGT                                                                                           <  3:290243/130‑1                                                                                  AACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGT                                                                                           >  4:290243/1‑130                                                                                                                                                        GCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAG  <  4:248265/149‑1                                                                                                                                                        GCCTGTTGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAG  <  5:102551/149‑1                                                                                                                                                                                                                                                                                                              CCCGAGGCGGTCGACCTGCACTTGCAAGGTGAGCTGTATCTGCGCCTGGACGAACATGTGCAAGCCAAGGCAGGCAGCGCCAACGCCCGGGGTACCGTGGCAGGGCTGCTCGCACGCAAGCAACTGACTGGCGCACAAGGCAACGCTATCGGCCTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5660883‑5661040 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcctgttGCTCGGGGCCGTGCGGCCAGCCCCACACGAACAGGCCGATAGCGTTGCCTTGTGCGCCAGTCAGTTGCTTGCGTGCGAGCAGCCCTGCCACGGTACCCCGGGCGTTGGCGCTGCCTGCCTTGGCTTGCACATGTTCGTCCAG  <  NC_002947/5661069‑5660928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.