| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5878215 = | 52 (0.980) | 6 (0.120) | 6/236 | NT | 10.9% | coding (782/921 nt) | PP_5152 | hypothetical protein |
| ? | NC_002947 | 5878279 = | 50 (1.020) | coding (718/921 nt) | PP_5152 | hypothetical protein | |||||
CGCTCAAGGGTGAGAAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5878365‑5878215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAATGATCAG > NC_002947/5878279‑5878426 CGCTCAAGGGTGAGAAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAA < 4:65115/149‑1CGCTCAAGGGTGAGAAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAA < 8:116661/149‑1 GGTGAGAAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGC > 1:284971/1‑135 GGTGAGAAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGC < 2:284971/135‑1 AAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAG < 3:308472/132‑1 AAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAG > 4:308472/1‑132 TGGCCACTTGCTGGTGCTATCGGACGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCC > 2:225365/1‑149 CACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTT > 3:244874/1‑147 TTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCG > 3:88054/1‑149 CGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTG < 4:88054/149‑1 GAGCTGGACGAGCAGGGCCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTG < 4:244874/148‑1 CTGGACGAGCAGGGCCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCG < 1:225365/149‑1 CCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATAGCTAGGCAACGGCTGCTTCTCAACCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGG > 5:243600/1‑132 GCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAAT > 4:330773/1‑148 TGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAATGATCAG < 5:273291/149‑1 CGCTCAAGGGTGAGAAGCAGCCGTTGCCTAGCGATGAACTCGACTTGCGCAACCTGTCTGCGCTGGGTGTCGACCCGCGTACTGGCCACTTGCTGGTGCTATCGGCCGACTCCAACATGCTGCTGGAGCTGGACGAGCAGGGCCAGCAAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5878365‑5878215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAATGATCAG > NC_002947/5878279‑5878426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |