New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5878215 =52 (0.980)6 (0.120) 6/236 NT 10.9% coding (782/921 nt) PP_5152 hypothetical protein
?NC_002947 5878279 = 50 (1.020)coding (718/921 nt) PP_5152 hypothetical protein

CCTGTCGTCCATGGCCACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAATGATCAG  >  NC_002947/5878133‑5878426
                                                                                                                                                  |                                                                                                                                                    
aagggtgagaagcagccgttgcctagcgatgaactcgacttgcgcaacctgtctgcgctgggtgtcgacccgcgtactggccACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTg                                                                                                                                                      >  3:244874‑M1/83‑147 (MQ=255)
 cTGTCGTCCATGGCCACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGc                                                                                                                                                    >  4:45121/1‑148 (MQ=255)
  gggtgagaagcagccgttgcctagcgatgaactcgacttgcgcaacctgtctgcgctgggtgtcgacccgcgtactggccACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGTCCGATAGCACCAGCAAGTGGCCa                                                                                                                                                  >  2:225365‑M1/81‑149 (MQ=255)
       tcCATGGCCACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTAcg                                                                                                                                             >  1:89254/1‑149 (MQ=255)
             gCCACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGt                                                                                                                                        <  3:45121/148‑1 (MQ=255)
             gCCACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTc                                                                                                                                       <  5:294975/149‑1 (MQ=255)
               cACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCgg                                                                                                                                          <  5:26609/144‑1 (MQ=255)
               cACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCgg                                                                                                                                          >  6:26609/1‑144 (MQ=255)
                 ccccTTCATCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGaca                                                                                                                                   <  8:249684/149‑1 (MQ=255)
                       cAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAg                                                                                                                              <  7:62451/148‑1 (MQ=255)
                         gCCCGCGGAATGGTGCCTTCAAGCCCGTAGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTACTGGCCCTGCTCGTCCAGCTCCAGCACCAAGTTGGAGTCGGCCGATAGCACAAGCAAGTGGCCAGTACGCGGGTCGCCCCCCAgcg                                                                                                                            >  5:948/1‑148 (MQ=255)
                          cccGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCa                                                                                                                          <  3:53739/149‑1 (MQ=255)
                                gAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGacac                                                                                                                                  <  2:77184/135‑1 (MQ=255)
                                  aTGGTGCCTTCAAGCCCGTTGAAGCCGCCCTGCAGGGTCATGAAGCTGACTTGCTGGCGCTGATCGTCCATCTCCTGCAGAATGTTGGAGTCGGCAGATTGCACCTGCAAGTGGCCAGTACGCGGTTCGACACCCAGCGCAGACAGGtt                                                                                                                  <  6:948/149‑1 (MQ=255)
                                        ccTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTgcg                                                                                                               <  7:16212/146‑1 (MQ=255)
                                        ccTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTgcg                                                                                                               >  8:16212/1‑146 (MQ=255)
                                         cTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGACCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAg                                                                                                           >  5:154068/1‑149 (MQ=255)
                                            cAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTgcgc                                                                                                              >  1:341737/1‑143 (MQ=255)
                                            cAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTgcgc                                                                                                              <  2:341737/143‑1 (MQ=255)
                                              aGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAg                                                                                                      >  2:15311/1‑149 (MQ=255)
                                               gCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGt                                                                                                                   <  6:36414/135‑1 (MQ=255)
                                               gCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGt                                                                                                                   >  5:36414/1‑135 (MQ=255)
                                                cccGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGtt                                                                                                    <  2:89254/149‑1 (MQ=255)
                                                         gccgccCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAg                                                                                          >  5:257878/1‑149 (MQ=255)
                                                          ccgccCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAgg                                                                                         >  4:172211/1‑149 (MQ=255)
                                                              ccAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGt                                                                                                          <  5:297562/129‑1 (MQ=255)
                                                              ccAGCAGCGTCATGAAGCAGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGt                                                                                                          >  6:297562/1‑129 (MQ=255)
                                                                agcagcGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGACCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACgg                                                                                   <  6:154068/149‑1 (MQ=255)
                                                                     cGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGgctgct                                                                              <  8:204326/149‑1 (MQ=255)
                                                                      gTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCtt                                                                             <  8:129638/149‑1 (MQ=255)
                                                                          tGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCa                                                                         >  6:305406/1‑149 (MQ=255)
                                                                           gAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCAc                                                                        >  8:229031/1‑149 (MQ=255)
                                                                             tggccacttgctggtgctatcggacgactccaacatgctgctggagctggacgagcagggccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCAccc                                                                      >  2:225365‑M2/70‑149 (MQ=255)
                                                                              gCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTTGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCACTCGCTAGGCAACGGCTGCTTCTCAccc                                                                      <  1:15311/149‑1 (MQ=255)
                                                                                 cacttgctggtgctatcggccgactccaacatgctgctggagctggacgagcagggccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCtt                                                                    >  3:244874‑M2/66‑147 (MQ=255)
                                                                                    ttgctggtgctatcggccgactccaacatgctgctggagctggacgagcagggccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCg                                                               >  3:88054‑M2/63‑149 (MQ=255)
                                                                                    TTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCg                                                               <  4:65115‑M1/149‑1 (MQ=255)
                                                                                    TTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCg                                                               <  8:116661‑M1/149‑1 (MQ=255)
                                                                                       CTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCtt                                                                             <  3:308472‑M1/132‑1 (MQ=255)
                                                                                       CTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCtt                                                                             >  4:308472‑M1/1‑132 (MQ=255)
                                                                                          GCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCAcc                                                                       >  1:284971‑M1/1‑135 (MQ=255)
                                                                                          GCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCAcc                                                                       <  2:284971‑M1/135‑1 (MQ=255)
                                                                                           cccTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGAAAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCg                                                        <  5:305406/149‑1 (MQ=255)
                                                                                            ccTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGa                                                                                                       >  5:23137/1‑102 (MQ=255)
                                                                                            ccTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGa                                                                                                       <  6:23137/102‑1 (MQ=255)
                                                                                                cTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCAt                                                   >  3:301789/1‑149 (MQ=255)
                                                                                                   gTCCAGCTTCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCg                                                 <  5:320353/148‑1 (MQ=255)
                                                                                                    tccagctccagcAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGgt                                               >  2:13266/1‑149 (MQ=255)
                                                                                                     cgactccaacatgctgctggagctggacgagcagggccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGgtg                                              <  4:88054‑M2/104‑1 (MQ=255)
                                                                                                     ccagctccagcAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGgtg                                              <  7:116661/149‑1 (MQ=255)
                                                                                                     ccagctccagcAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATAGCTAGGCAACGGCTGCATCTCACCCATGAGCGGGCTGCGGCCATCGgtg                                              >  6:273291/1‑149 (MQ=255)
                                                                                                            cagcagCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAg                                        <  3:172211/148‑1 (MQ=255)
                                                                                                              gcagcaTGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTc                                           >  6:219352/1‑143 (MQ=255)
                                                                                                              gcagcaTGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTc                                           <  5:219352/143‑1 (MQ=255)
                                                                                                                agcaTGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTa                                   <  3:65115/149‑1 (MQ=255)
                                                                                                                     gTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCtt                                                                    <  6:336962/111‑1 (MQ=255)
                                                                                                                     gTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCtt                                                                    >  5:336962/1‑111 (MQ=255)
                                                                                                                        gagctggacgagcagggccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTg                            <  4:244874‑M2/122‑1 (MQ=255)
                                                                                                                          aGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTgggc                         <  4:301789/149‑1 (MQ=255)
                                                                                                                           gTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCgg                                                              <  2:204042/111‑1 (MQ=255)
                                                                                                                           gTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCgg                                                              >  1:204042/1‑111 (MQ=255)
                                                                                                                           ctggacgagcagggccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTgggcg                        <  1:225365‑M2/126‑1 (MQ=255)
                                                                                                                            tCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTgggcgg                       <  1:13266/149‑1 (MQ=255)
                                                                                                                               gCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGggcgggcg                    >  5:77481/1‑149 (MQ=255)
                                                                                                                                ccGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGgcgc                   >  7:44923/1‑149 (MQ=255)
                                                                                                                                         ccagcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATAGCTAGGCAACGGCTGCTTCTCAACCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTgg                           >  5:243600‑M2/10‑132 (MQ=255)
                                                                                                                                            gcaagtGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAAt        >  4:330773‑M2/7‑148 (MQ=255)
                                                                                                                                                 tGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAATGATCAg  <  5:273291‑M2/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
CCTGTCGTCCATGGCCACCCCTTCAGCCCGCGGAATGGTGCCTTCAAGCCCGTTGAAGCCGCCCAGCAGCGTCATGAAGCTGACTTGCTGGCCCTGCTCGTCCAGCTCCAGCAGCATGTTGGAGTCGGCCGATAGCACCAGCAAGTGGCCAGTACGCGGGTCGACACCCAGCGCAGACAGGTTGCGCAAGTCGAGTTCATCGCTAGGCAACGGCTGCTTCTCACCCTTGAGCGGGCTGCGGCCATCGGTGTTCCAGGTGTACAGCTTGGGCGGGCGCTCCTCGCCAATGATCAG  >  NC_002947/5878133‑5878426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.