New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5936201	55 (1.040)	3 (0.060)	3/242	NT	5.3%	coding (263/450 nt)	PP_5205	hypothetical protein
	?	NC_002947	= 5936232	54 (1.070)					coding (294/450 nt)	PP_5205	hypothetical protein

TCTGCGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5936049‑5936201 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccacATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGGT  <  NC_002947/5936232‑5936087                                                                                                                                                                                                                                                                                                             TCTGCGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAG                                                                                                                                                         <  5:220334/148‑1                                             CCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTG                                                                                                            <  8:150270/149‑1                                                                     CCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCC                                                                                                               <  3:10003/122‑1                                                                     CCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCC                                                                                                               >  4:10003/1‑122                                                                                                                                                      CCACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGG   >  6:291555/1‑149                                                                                                                                                      CCACATCAACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGAATCTGGCAATGCCGCCTATGACGGGTTGCGGGCAGCTGGAGTGG   >  1:136738/1‑149                                                                                                                                                       CACATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGGT  <  5:45683/149‑1                                                                                                                                                                                                                                                                                                             TCTGCGGGCCATGAGCGTGGGTGACGAATTCTTCTTCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5936049‑5936201 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccacATCCACCGCGCTCCACGGGTTCTTGTCGGTCGTGGCCTTGGCATCGTGATAATGGCTTTCAGGGTCCAGCGCGGTCGGGTCGGGGTAGGCCGCGCGGGTGATTCTGGCAATGCCGGCTATGCCGGGTTGCGGGCAGCTGGAGTGGT  <  NC_002947/5936232‑5936087

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.