New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 593620155 (1.040)3 (0.060) 3/242 NT 5.3% coding (263/450 nt) PP_5205 hypothetical protein
?NC_002947 = 5936232 54 (1.070)coding (294/450 nt) PP_5205 hypothetical protein

TCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGATTGTC  >  NC_002947/5936084‑5936376
                                                                                                                                                    |                                                                                                                                                
tctACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGAt                                                                                                                                                  >  6:115484/1‑149 (MQ=255)
 ctACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGAt                                                                                                                                                  <  4:14606/148‑1 (MQ=255)
   aCCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtg                                                                                                                                               <  5:45683‑M2/149‑4 (MQ=255)
    ccACTCCAGCTGCCCGCAACCCGTCATAGGCGGCATTGCCAGATTCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTTGATgtgg                                                                                                                                              >  1:136738‑M2/1‑145 (MQ=255)
    ccACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtgg                                                                                                                                              >  6:291555‑M2/1‑145 (MQ=255)
         ccAGCTGCCCGCAACCCGGCATAGACGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATTCCAAGGCCACGACCGACAAGAACCCGTGGAGCTCGGTGGATGTGGGCCAc                                                                                                                                         >  6:279176/1‑149 (MQ=255)
             cTGCCCGCAACCCGGCATAGCCGGCAATGCCAGAATCACCCGCGCAGCCTACCCCGACACGAACGCGCTGGAACCTGAAAGCCATTATCACGATGCCAAATCCACGAACGACAAAAACACCAGGACAGCAGTCGATGTGGCCCAAGTa                                                                                                                                      >  4:13635/1‑148 (MQ=255)
                cccGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACaaa                                                                                                                                  >  3:36886/1‑149 (MQ=255)
                  cGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGCTGGATGTGGCCCACGTAAAAAc                                                                                                                                 >  8:289846/1‑148 (MQ=255)
                     aaCCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCttt                                                                                                                             >  8:295029/1‑149 (MQ=255)
                          ggCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAg                                                                                                                        <  5:115484/149‑1 (MQ=255)
                           tcATAGCCGGAATTGCAAGAATCACCCGCGCTGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACAGACAAGAACCCGTGGAGCGCGGTGGATGTTGTCCACGTACAAACCTTTCCAAgg                                                                                                                       <  5:279176/148‑1 (MQ=255)
                           gCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAgg                                                                                                                       <  8:40727/149‑1 (MQ=255)
                             aTAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGt                                                                                                                     <  3:318247/149‑1 (MQ=255)
                                gCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCt                                                                                                                  <  4:81286/149‑1 (MQ=255)
                                             gAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGggcgg                                                                                                     >  8:46051/1‑149 (MQ=255)
                                              aaTCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTgg                                                                                                                <  5:86720/137‑1 (MQ=255)
                                              aaTCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTgg                                                                                                                >  6:86720/1‑137 (MQ=255)
                                                tCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTg                                                                                                  <  6:45683/149‑1 (MQ=255)
                                                   cccGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaaa                                                                                               >  6:145754/1‑149 (MQ=255)
                                                        gcgGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTTGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAAcagca                                                                                          <  7:289846/149‑1 (MQ=255)
                                                           gCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCaa                                                                                                                         >  2:208784/1‑115 (MQ=255)
                                                             cTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCg                                                                                     <  5:166812/149‑1 (MQ=255)
                                                                ccccGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTc                                                                                  >  1:131053/1‑149 (MQ=255)
                                                                 cccgacccgaCCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCt                                                                                 >  7:319671/1‑149 (MQ=255)
                                                                 cccgacccgaCCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCt                                                                                 <  5:145754/149‑1 (MQ=255)
                                                                          accGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGtt                                                                        <  2:131053/149‑1 (MQ=255)
                                                                            cgcgCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGc                                                                      >  4:228987/1‑149 (MQ=255)
                                                                                   gACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGt                                                               <  4:36886/149‑1 (MQ=255)
                                                                                    aCCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTg                                                              <  8:319671/149‑1 (MQ=255)
                                                                                        tGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCaa                                                           >  1:318224/1‑148 (MQ=255)
                                                                                              ccATTATCACGATGCCAAGGCCAGGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCa                                                    <  3:228987/149‑1 (MQ=255)
                                                                                              ccATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCa                                                    <  3:13635/149‑1 (MQ=255)
                                                                                               cATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAg                                                   >  3:116511/1‑149 (MQ=255)
                                                                                                aTTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAgc                                                  >  8:308724/1‑149 (MQ=255)
                                                                                                 ttATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGc                                                                                                                   <  5:176335/83‑1 (MQ=255)
                                                                                                 ttATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGc                                                                                                                   >  6:176335/1‑83 (MQ=255)
                                                                                                      aCGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTc                                                                             <  5:355091/116‑1 (MQ=255)
                                                                                                      aCGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTc                                                                             >  6:355091/1‑116 (MQ=255)
                                                                                                        gATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTc                                          >  6:103445/1‑149 (MQ=255)
                                                                                                            ccAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTg                                                                                                           <  3:37914/80‑1 (MQ=255)
                                                                                                            ccAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTg                                                                                                           >  4:37914/1‑80 (MQ=255)
                                                                                                            ccAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTc                                      <  1:16605/149‑1 (MQ=255)
                                                                                                             cAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccggctatgccgggttgcgggcagctgg                                     <  8:150270‑M2/149‑110 (MQ=255)
                                                                                                             cAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCa                                     >  5:265799/1‑149 (MQ=255)
                                                                                                              aaGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaa                                                                                                >  8:114423/1‑89 (MQ=255)
                                                                                                              aaGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaa                                                                                                <  7:114423/89‑1 (MQ=255)
                                                                                                                ggCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccgg                                                             >  4:10003‑M2/1‑37 (MQ=255)
                                                                                                                ggCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccgg                                                             <  3:10003‑M2/122‑86 (MQ=255)
                                                                                                                   cACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCgg                               >  6:25590/1‑149 (MQ=255)
                                                                                                                   cACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCgg                               <  2:318224/149‑1 (MQ=255)
                                                                                                                         cgacAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGc                         <  5:25590/149‑1 (MQ=255)
                                                                                                                           acAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAg                                                       <  7:293502/117‑1 (MQ=255)
                                                                                                                           acAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAg                                                       >  8:293502/1‑117 (MQ=255)
                                                                                                                           acAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGccc                       >  8:8403/1‑149 (MQ=255)
                                                                                                                             aaGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAgg                                                      >  7:160828/1‑116 (MQ=255)
                                                                                                                             aaGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAgg                                                      <  8:160828/116‑1 (MQ=255)
                                                                                                                             aaGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGa                     <  7:295029/149‑1 (MQ=255)
                                                                                                                               gAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGcccattg                   >  8:32579/1‑145 (MQ=255)
                                                                                                                                 aCCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCaa                 <  8:164087/149‑1 (MQ=255)
                                                                                                                                 aCCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCaa                 >  7:164087/1‑149 (MQ=255)
                                                                                                                                       ggAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCAAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTATGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGACCAATGGGCg           >  7:262080/1‑149 (MQ=255)
                                                                                                                                             cgGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTTGTGCAAAAAGGCAGGCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGAtt     <  7:190146/149‑1 (MQ=255)
                                                                                                                                                tGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCGGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGATTGTc  >  4:200534/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                
TCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGATTGTC  >  NC_002947/5936084‑5936376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.