New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5936201 | 55 (1.040) | 3 (0.060) | 3/242 | NT | 5.3% | coding (263/450 nt) | PP_5205 | hypothetical protein |
? | NC_002947 | = 5936232 | 54 (1.070) | coding (294/450 nt) | PP_5205 | hypothetical protein |
TCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGATTGTC > NC_002947/5936084‑5936376 | tctACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGAt > 6:115484/1‑149 (MQ=255) ctACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGAt < 4:14606/148‑1 (MQ=255) aCCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtg < 5:45683‑M2/149‑4 (MQ=255) ccACTCCAGCTGCCCGCAACCCGTCATAGGCGGCATTGCCAGATTCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTTGATgtgg > 1:136738‑M2/1‑145 (MQ=255) ccACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtgg > 6:291555‑M2/1‑145 (MQ=255) ccAGCTGCCCGCAACCCGGCATAGACGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATTCCAAGGCCACGACCGACAAGAACCCGTGGAGCTCGGTGGATGTGGGCCAc > 6:279176/1‑149 (MQ=255) cTGCCCGCAACCCGGCATAGCCGGCAATGCCAGAATCACCCGCGCAGCCTACCCCGACACGAACGCGCTGGAACCTGAAAGCCATTATCACGATGCCAAATCCACGAACGACAAAAACACCAGGACAGCAGTCGATGTGGCCCAAGTa > 4:13635/1‑148 (MQ=255) cccGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACaaa > 3:36886/1‑149 (MQ=255) cGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGCTGGATGTGGCCCACGTAAAAAc > 8:289846/1‑148 (MQ=255) aaCCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCttt > 8:295029/1‑149 (MQ=255) ggCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAg < 5:115484/149‑1 (MQ=255) tcATAGCCGGAATTGCAAGAATCACCCGCGCTGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACAGACAAGAACCCGTGGAGCGCGGTGGATGTTGTCCACGTACAAACCTTTCCAAgg < 5:279176/148‑1 (MQ=255) gCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAgg < 8:40727/149‑1 (MQ=255) aTAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGt < 3:318247/149‑1 (MQ=255) gCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCt < 4:81286/149‑1 (MQ=255) gAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGggcgg > 8:46051/1‑149 (MQ=255) aaTCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTgg < 5:86720/137‑1 (MQ=255) aaTCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTgg > 6:86720/1‑137 (MQ=255) tCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTg < 6:45683/149‑1 (MQ=255) cccGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaaa > 6:145754/1‑149 (MQ=255) gcgGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTTGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAAcagca < 7:289846/149‑1 (MQ=255) gCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCaa > 2:208784/1‑115 (MQ=255) cTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCg < 5:166812/149‑1 (MQ=255) ccccGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTc > 1:131053/1‑149 (MQ=255) cccgacccgaCCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCt > 7:319671/1‑149 (MQ=255) cccgacccgaCCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCt < 5:145754/149‑1 (MQ=255) accGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGtt < 2:131053/149‑1 (MQ=255) cgcgCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGc > 4:228987/1‑149 (MQ=255) gACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGt < 4:36886/149‑1 (MQ=255) aCCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTg < 8:319671/149‑1 (MQ=255) tGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCaa > 1:318224/1‑148 (MQ=255) ccATTATCACGATGCCAAGGCCAGGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCa < 3:228987/149‑1 (MQ=255) ccATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCa < 3:13635/149‑1 (MQ=255) cATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAg > 3:116511/1‑149 (MQ=255) aTTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAgc > 8:308724/1‑149 (MQ=255) ttATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGc < 5:176335/83‑1 (MQ=255) ttATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGc > 6:176335/1‑83 (MQ=255) aCGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTc < 5:355091/116‑1 (MQ=255) aCGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTc > 6:355091/1‑116 (MQ=255) gATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTc > 6:103445/1‑149 (MQ=255) ccAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTg < 3:37914/80‑1 (MQ=255) ccAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTg > 4:37914/1‑80 (MQ=255) ccAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTc < 1:16605/149‑1 (MQ=255) cAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccggctatgccgggttgcgggcagctgg < 8:150270‑M2/149‑110 (MQ=255) cAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCa > 5:265799/1‑149 (MQ=255) aaGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaa > 8:114423/1‑89 (MQ=255) aaGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGaa < 7:114423/89‑1 (MQ=255) ggCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccgg > 4:10003‑M2/1‑37 (MQ=255) ggCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATgtggccttggcatcgtgataatggctttcagggtccagcgcggtcgggtcggggtaggccgcgcgggtgattctggcaatgccgg < 3:10003‑M2/122‑86 (MQ=255) cACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCgg > 6:25590/1‑149 (MQ=255) cACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCgg < 2:318224/149‑1 (MQ=255) cgacAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGc < 5:25590/149‑1 (MQ=255) acAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAg < 7:293502/117‑1 (MQ=255) acAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAg > 8:293502/1‑117 (MQ=255) acAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGccc > 8:8403/1‑149 (MQ=255) aaGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAgg > 7:160828/1‑116 (MQ=255) aaGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAgg < 8:160828/116‑1 (MQ=255) aaGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGa < 7:295029/149‑1 (MQ=255) gAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGcccattg > 8:32579/1‑145 (MQ=255) aCCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCaa < 8:164087/149‑1 (MQ=255) aCCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCaa > 7:164087/1‑149 (MQ=255) ggAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCAAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTATGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGACCAATGGGCg > 7:262080/1‑149 (MQ=255) cgGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTTGTGCAAAAAGGCAGGCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGAtt < 7:190146/149‑1 (MQ=255) tGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCGGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGATTGTc > 4:200534/1‑149 (MQ=255) | TCTACCACTCCAGCTGCCCGCAACCCGGCATAGCCGGCATTGCCAGAATCACCCGCGCGGCCTACCCCGACCCGACCGCGCTGGACCCTGAAAGCCATTATCACGATGCCAAGGCCACGACCGACAAGAACCCGTGGAGCGCGGTGGATGTGGCCCACGTACAAACCTTTCCAAGGGTGCTGGAACTGGGGCGGCTGAAACAGCAGGCCGGTCTGGTCGAGTTGCCGCTGGTGCAAAAAGGCAGCCGCCTGTCGGTCATGCCGGTAACGCCCGAGCAATGGGCGGTGATTGTC > NC_002947/5936084‑5936376 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |