New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6027717	37 (0.700)	3 (0.060)	3/244	NT	8.2%	coding (140/1140 nt)	PP_5277	MFS transporter
	?	NC_002947	= 6027744	32 (0.630)					coding (113/1140 nt)	PP_5277	MFS transporter

AATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6027608‑6027717 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGCTTCGCCATCGGCGTGATGGCGGCAATGCCGGCGTTGGGCGTACTGGCCGGCGCCAGCCTGGCCAGCCGCCTGGCAGGTTGGGTT  <  NC_002947/6027744‑6027659                                                                                                                                                                                                      AATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCAGCTTCGCCATCGGCGTGATGGCGGCAATGCCGGCGTTGG                                                 <  6:330733/149‑1                   CCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCAGCTTCGCCATCGGCGTGATGGCGGCAATGCCGG                                                       >  5:277894/1‑125                   CCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCAGCTTCGCCATCGGCGTGATGGCGGCAATGCCGG                                                       <  6:277894/125‑1                                                                                                           GGCAGCTTCGCCATCGGCGTGATGGCGGCAATGCCGGCGTTGGGCGTACTGGCCGGCGCCAGCCTGGCCAGCCGCCTGGCAGGTTGGGTT  >  7:164886/1‑90                                                                                                           GGCAGCTTCGCCATCGGCGTGATGGCGGCAATGCCGGCGTTGGGCGTACTGGCCGGCGCCAGCCTGGCCAGCCGCCTGGCAGGTTGGGTT  <  8:164886/90‑1                                                                                                                                                                                                      AATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6027608‑6027717 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGCTTCGCCATCGGCGTGATGGCGGCAATGCCGGCGTTGGGCGTACTGGCCGGCGCCAGCCTGGCCAGCCGCCTGGCAGGTTGGGTT  <  NC_002947/6027744‑6027659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.