New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6027717	37 (0.700)	3 (0.060)	3/244	NT	8.2%	coding (140/1140 nt)	PP_5277	MFS transporter
	?	NC_002947	= 6027744	32 (0.630)					coding (113/1140 nt)	PP_5277	MFS transporter

GCCAATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTT  >  NC_002947/6027605‑6027892                                                                                                                                            |                                                                                                                                                     gCCAATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGc                                                                                                                                             >  7:42497/1‑149 (MQ=255) gCCAATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGc                                                                                                                                             >  4:155707/1‑149 (MQ=255) gCCAATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGc                                                                                                                                             <  4:15724/149‑1 (MQ=255)   cAATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGc                                                                                                                                             >  1:67988/1‑147 (MQ=255)   cAATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGc                                                                                                                                             <  2:67988/147‑1 (MQ=255)      tCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAg                                                                                                                                        <  7:171903/149‑1 (MQ=255)              gccccgccccACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAg                                                                                                                                <  8:42497/149‑1 (MQ=255)               ccccgccccACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCTGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAgg                                                                                                                               <  6:96006/149‑1 (MQ=255)                cccgccccACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGgc                                                                                                                              >  7:39746/1‑149 (MQ=255)                                aggcGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCgg                                                                                                              <  8:60671/149‑1 (MQ=255)                                  gcgcATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCa                                                                                                            >  2:190982/1‑149 (MQ=255)                                  gcgcATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCa                                                                                                            >  7:146961/1‑149 (MQ=255)                                           gtaaGGTAGCCCAACCAAACCTGCCCGCGGGCGGGCCTGGGTGGGGCGGGCATGAAGGCCCAAGCCCGGCATTGCCGCCTTCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGc                                                                                                   <  8:146961/147‑1 (MQ=255)                                                gTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAgc                                                                                              <  5:232252/149‑1 (MQ=255)                                                    gCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGc                                                                                                             <  5:151464/130‑1 (MQ=255)                                                    gCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGc                                                                                                             >  6:151464/1‑130 (MQ=255)                                                       aacccaaccTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCtgcc                                                                                                                                                  >  7:164886‑M2/1‑86 (MQ=255)                                                       aacccaaccTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCtgcc                                                                                                                                                  <  8:164886‑M2/90‑5 (MQ=255)                                                        acccaaccTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCATCGGCATGCTCACGCCAAGCGCCAGccc                                                                                      <  1:190982/149‑1 (MQ=255)                                                         cccaaccTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCt                                                                                                                                    <  4:242867/102‑1 (MQ=255)                                                         cccaaccTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCt                                                                                                                                    >  3:242867/1‑102 (MQ=255)                                                               cTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTg                                                                               <  3:155707/149‑1 (MQ=255)                                                                          atGGCCAGGCTGGCGCCGGCCAGTACGACCAACGCCGGCATTGCAGCCATCACGCATATGGCGAAGCTGCCGTTGCCGCTGGCGTCCTGGCGCAGGGACACCAGCGTCATGCTCACGCCAAGGGGCAGCACGACACTGAGCACCGATga                                                                    <  8:39746/148‑2 (MQ=255)                                                                           tGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGc                                                                    >  4:42276/1‑148 (MQ=255)                                                                             gCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAg                                                                 >  3:214042/1‑149 (MQ=255)                                                                              ccAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAg                                                                 >  2:313012/1‑148 (MQ=255)                                                                                  gCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAg                                                                                                                                <  8:233929/81‑1 (MQ=255)                                                                                  gCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAg                                                                                                                                >  7:233929/1‑81 (MQ=255)                                                                                  gCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACgg                                                            <  3:42276/149‑1 (MQ=255)                                                                                      gcgcCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGa                                                         <  6:89214/148‑1 (MQ=255)                                                                                          cGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCAc                                                                          >  2:263327/1‑127 (MQ=255)                                                                                                      ccAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCtgccggcgttgggcgtactggccggcgccagcctggccagccgcctggcaggttgggttggcgtaccttcggcgatgcgcctgtgcctgtggggcggggcgctgtcgatt                                        <  6:330733‑M2/149‑111 (MQ=255)                                                                                                      ccAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGc                                                                    >  4:76061/1‑121 (MQ=255)                                                                                                      ccAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGc                                                                    <  3:76061/121‑1 (MQ=255)                                                                                                      ccAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACg                                         >  1:218370/1‑148 (MQ=255)                                                                                                        aaCGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCAt                                      <  4:214042/149‑1 (MQ=255)                                                                                                            ccGGCATTGCCGCCATCACGCCGATGGCGAAGCtgccggcgttgggcgtactggccggcgccagcctggccagccgcctggcaggttgggttggcgtaccttcggcgatgcgcctgtgcctgtgg                                                          <  6:277894‑M2/125‑93 (MQ=255)                                                                                                            ccGGCATTGCCGCCATCACGCCGATGGCGAAGCtgccggcgttgggcgtactggccggcgccagcctggccagccgcctggcaggttgggttggcgtaccttcggcgatgcgcctgtgcctgtgg                                                          >  5:277894‑M2/1‑33 (MQ=255)                                                                                                                       gccATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGcc                       <  1:313012/149‑1 (MQ=255)                                                                                                                          aTCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAat                    <  6:260703/149‑1 (MQ=255)                                                                                                                                  gATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAg            >  6:184855/1‑149 (MQ=255)                                                                                                                                      gCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAgggg         <  5:184855/148‑1 (MQ=255)                                                                                                                                            cTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCAttt  >  2:87887/1‑149 (MQ=255)                                                                                                                                            |                                                                                                                                                     GCCAATCGACAGCGCCCCGCCCCACAGGCACAGGCGCATCGCCGAAGGTACGCCAACCCAACCTGCCAGGCGGCTGGCCAGGCTGGCGCCGGCCAGTACGCCCAACGCCGGCATTGCCGCCATCACGCCGATGGCGAAGCTGCCGTAGCCCCAGGCCTCCAGGCGCAGGGACACCAGCGGCATGCTCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTT  >  NC_002947/6027605‑6027892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.