| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6088872 = | 51 (0.970) | 4 (0.080) | 4/242 | NT | 8.3% | coding (51/1104 nt) | potF‑IV | putrescine‑binding protein |
| ? | NC_002947 | 6088914 = | 40 (0.800) | coding (93/1104 nt) | potF‑IV | putrescine‑binding protein | |||||
CCAGTTATATACACGCAGGGTGCGCTGCTCGGCTTGTGCATGCAGGGCGCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6088926‑6088872‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGCGGCGTGAAGCTGGTGTACGACATCTTCGACACCAACGAGGCGCTGGAAGCCAAGCTGCTGACCGGCAACTCCG > NC_002947/6088914‑6089047 CCAGTTATATACACGCAGGGTGCGCTGCTCGGCTTGTGCATGCAGGGCGCCTGC > 1:131273/1‑54CCAGTTATATACACGCAGGGTGCGCTGCTCGGCTTGTGCATGCAGGGCGCCTGC < 2:131273/54‑1 TACACGCAGGGTGCGCTGCTCGGCTTGTGCATGCAGGGCGCCTGCGTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGC > 1:338924/1‑107 TACACGCAGGGTGCGCTGCTCGGCTTGTGCATGCAGGGCGCCTGCGTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGC < 2:338924/107‑1 AGGGTGCGCTGCTCGGCTTGTGCATGCAGGGCGCCTGCGTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGCGGCGTGAAGCTGGTGTACGACATCTTCGACACCAACGAGGCGCTGGAAG > 1:224290/1‑149 TGCAGGGCGCCTGCGTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGCGGCGTGAAGCTGGTGTACGACATCTTCGACACCAACGAGGCGCTGGAAGCCAAGCTGCTGACCGGCAACTCCG < 2:224290/149‑1 CCTGCGTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGCGGCGTGAAGCTGGT > 5:97311/1‑81 CCTGCGTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGCGGCGTGAAGCTGGT < 6:97311/81‑1 CCAGTTATATACACGCAGGGTGCGCTGCTCGGCTTGTGCATGCAGGGCGCCTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6088926‑6088872‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgTGTATATAACTGGTTCGATTACATCACCCCACAGACCTTGACTGCCTTCCAGAAGGACAGCGGCGTGAAGCTGGTGTACGACATCTTCGACACCAACGAGGCGCTGGAAGCCAAGCTGCTGACCGGCAACTCCG > NC_002947/6088914‑6089047 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |