New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 189276 =70 (1.330)4 (0.080) 4/244 NT 6.0% coding (1385/1947 nt) PP_0165 GGDEF domain‑containing protein
?NC_002947 189321 = 58 (1.140)coding (1430/1947 nt) PP_0165 GGDEF domain‑containing protein

GAACGGCTCGACCAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAG  >  NC_002947/189134‑189418
                                                                                                                                               |                                                                                                                                              
gAACGGCTCGACCAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCtt                                                                                                                                          >  4:202551/1‑149 (MQ=255)
     gcacGACCAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTCATAGAGTGCGCTTCCTCGCAACGGGTACTGAACAACAAAGTTATTTCGCGTTTGCGCGATGGACAGGGCGAGGCCATGCAGGCGGGCCGCTTCCTGc                                                                                                                                     >  5:364585/4‑149 (MQ=255)
     gCTCGACCAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGc                                                                                                                                     <  3:223789/149‑1 (MQ=255)
      cTCGACCAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGcc                                                                                                                                    >  1:178857/1‑149 (MQ=255)
         gACCAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTg                                                                                                                                 <  6:304344/149‑1 (MQ=255)
           ccAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTGGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGc                                                                                                                               >  7:190404/1‑149 (MQ=255)
            cAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCt                                                                                                                              >  5:139966/1‑149 (MQ=255)
            cAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCt                                                                                                                              <  2:277540/149‑1 (MQ=255)
             aaGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTg                                                                                                                             >  5:152341/1‑149 (MQ=255)
                      tcaATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAgc                                                                                                                         >  6:46323/1‑144 (MQ=255)
                      tcaATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAgc                                                                                                                         <  5:46323/144‑1 (MQ=255)
                           gaaaacgcgctgaagggccttggggtcggccagggtggcggcggacaggttcaacgccagcacttggtcatgccctcgcaggtgcgccaacactttctccagcaccagcacatccaGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCt                                                                                                                <  5:357684‑M1/33‑1 (MQ=255)
                             gCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGa                                                                                                             <  8:190404/149‑1 (MQ=255)
                             gCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGa                                                                                                             >  8:19625/1‑149 (MQ=255)
                               aTTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATg                                                                                                           >  2:217112/1‑149 (MQ=255)
                               aTTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATg                                                                                                           <  3:202551/149‑1 (MQ=255)
                                   gctgaagggccttggggtcggccagggtggcggcggacaggttcaacgccagcacttggtcatgccctcgcaggtgcgccaacactttctccagcaccagcacatccaGCCGCTTCCTGCCTTGACTGGAGCGCTTCGGCTGGATGCcg                                                                                                        <  7:75420‑M1/41‑1 (MQ=255)
                                    gAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGcc                                                                                                         <  1:176673/146‑1 (MQ=255)
                                    gAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGcc                                                                                                         >  2:176673/1‑146 (MQ=255)
                                    gAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCcgcg                                                                                                      >  7:238472/1‑149 (MQ=255)
                                    gAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCcgc                                                                                                       <  6:301953/148‑1 (MQ=255)
                                        agggccttggggtcggccagggtggcggcggacaggttcaacgccagcacttggtcatgccctcgcaggtgcgccaacactttctccagcaccagcacatccaGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCt                                                                                                   >  6:357684‑M1/104‑149 (MQ=255)
                                         gggccttggggtcggccagggtggcggcggacaggttcaacgccagcacttggtcatgccctcgcaggtgcgccaacactttctccagcaccagcacatccaGCCGCTTCCTGCCTTGACTGGAGCGCTTCGGCTGGATGCCGCGGCTg                                                                                                  >  8:75420‑M1/103‑149 (MQ=255)
                                               ccagccagTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtgc                                                                                           >  5:343342/1‑149 (MQ=255)
                                               ccagccagTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtgc                                                                                           >  8:240069/1‑149 (MQ=255)
                                                 agcgagTGATAGAGTGCGGTTCGTCGCAACGGGTACTGCAGCACAATGTTATTTCGCGTTTTCGCGATGGGCAGGGCGAGGGGTTGCCGGCGGGCCGCTTCGTTCCTTGGCTGGTGCGCTTCGGCTGGATGCCGCGGCTGGATgtgctg                                                                                         <  2:28137/149‑1 (MQ=255)
                                                        gATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGAGTTTGCGCGATGGCCAGGGCGACGCCTTGCCGGCGGGCCCCATCCTGCCTTGGCAGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtcctggtgctg                                                                                   >  8:129166/1‑148 (MQ=255)
                                                         aTAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtgctggtgctg                                                                                   >  3:310238/1‑147 (MQ=255)
                                                         aTAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGga                                                                                 <  7:19625/149‑1 (MQ=255)
                                                         aTAGAGTGAGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTGGCGTTTGCGAGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGGTGGATCGCTTCGGCTGGATGCGGCGGCTGGATGTGCTGGTGCTGga                                                                                 <  7:129166/149‑1 (MQ=255)
                                                           agagTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGgag                                                                                >  4:319832/1‑148 (MQ=255)
                                                            gagTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGgaga                                                                               <  1:217112/148‑1 (MQ=255)
                                                             agTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGaaa                                                                             >  8:222758/1‑149 (MQ=255)
                                                             agTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTGCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGaaa                                                                             <  7:222758/149‑1 (MQ=255)
                                                                 cgcTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAgtgt                                                                         <  6:152341/149‑1 (MQ=255)
                                                                   cTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTg                                                                       <  2:178857/149‑1 (MQ=255)
                                                                    ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTgg                                                                                                              <  4:138357/109‑1 (MQ=255)
                                                                    ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGc                                                                                                    >  5:110868/1‑119 (MQ=255)
                                                                    ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGc                                                                                                    <  6:110868/119‑1 (MQ=255)
                                                                    ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGAt                                                                                               >  2:257566/1‑124 (MQ=255)
                                                                    ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGAt                                                                                               <  1:257566/124‑1 (MQ=255)
                                                                    ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTgg                                                                      >  4:37561/1‑149 (MQ=255)
                                                                      ccTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTgg                                                                      <  3:319832/147‑1 (MQ=255)
                                                                        tCGCAACGGGTACTGCACCACAAAGTTATTTCGAGTTTGAGCGAAGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGGGCTGGAGAAACTGTTGGCGCa                                                                  >  4:242532/1‑149 (MQ=255)
                                                                            aaCGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgc                                                                     >  1:340143/1‑142 (MQ=255)
                                                                            aaCGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgc                                                                     <  2:340143/142‑1 (MQ=255)
                                                                                 gTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAgg                                                         <  5:281337/149‑1 (MQ=255)
                                                                                   aCTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgcgc                                                                   <  5:66096/137‑1 (MQ=255)
                                                                                   aCTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgcgc                                                                   >  6:66096/1‑137 (MQ=255)
                                                                                       caccacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCAt                                                     <  6:139966/147‑1 (MQ=255)
                                                                                        accacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGAc                                                  <  6:343342/149‑1 (MQ=255)
                                                                                         ccacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCt                                                               >  6:190246/1‑135 (MQ=255)
                                                                                         ccacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCt                                                               <  5:190246/135‑1 (MQ=255)
                                                                                          cacaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTg                                                                       <  6:26709/126‑1 (MQ=255)
                                                                                          cacaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTg                                                                       >  5:26709/1‑126 (MQ=255)
                                                                                           acaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCaa                                               <  4:310238/149‑1 (MQ=255)
                                                                                           acaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCaa                                               <  3:37561/149‑1 (MQ=255)
                                                                                            caAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAg                                              >  6:314973/1‑149 (MQ=255)
                                                                                             aaaGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGt                                             >  2:307877/1‑149 (MQ=255)
                                                                                                     ttCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGGTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGt                                     >  3:66524/1‑149 (MQ=255)
                                                                                                       cgcgTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGtt                                    >  7:233761/1‑148 (MQ=255)
                                                                                                       cgcgTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGtt                                    <  8:238472/148‑1 (MQ=255)
                                                                                                         cgTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGaa                                 <  8:233761/149‑1 (MQ=255)
                                                                                                           tttGCGCGATGGCGAGGGCGAGGCCTTGCCGGCGGAGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAAc                                >  1:53503/1‑149 (MQ=255)
                                                                                                                        cAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAAc                                <  4:340191/135‑1 (MQ=255)
                                                                                                                        cAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAAc                                >  3:340191/1‑135 (MQ=255)
                                                                                                                          gggCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCAccc                >  2:272548/1‑149 (MQ=255)
                                                                                                                           ggCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCt               <  5:314973/149‑1 (MQ=255)
                                                                                                                                 gCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTg                                         >  7:181640/1‑117 (MQ=255)
                                                                                                                                 gCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTg                                         <  8:181640/117‑1 (MQ=255)
                                                                                                                                 gCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGa         <  2:53503/149‑1 (MQ=255)
                                                                                                                                  ccTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGAc        <  1:307877/149‑1 (MQ=255)
                                                                                                                                      gCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGAcccc     <  1:272548/148‑1 (MQ=255)
                                                                                                                                        cggcggGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAg  >  6:256671/1‑149 (MQ=255)
                                                                                                                                               |                                                                                                                                              
GAACGGCTCGACCAAGCGTTCATCAATGGGCATTTCGAGTTGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAG  >  NC_002947/189134‑189418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.