New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 189276 =70 (1.330)4 (0.080) 4/244 NT 6.0% coding (1385/1947 nt) PP_0165 GGDEF domain‑containing protein
?NC_002947 189321 = 58 (1.140)coding (1430/1947 nt) PP_0165 GGDEF domain‑containing protein

TGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGG  >  NC_002947/189174‑189458
                                                                                                                                                    |                                                                                                                                         
agggccttggggtcggccagggtggcggcggacaggttcaacgccagcacttggtcatgccctcgcaggtgcgccaacactttctccagcaccagcacatccaGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCt                                                                                                                                           >  6:357684‑M1/104‑149 (MQ=255)
 gggccttggggtcggccagggtggcggcggacaggttcaacgccagcacttggtcatgccctcgcaggtgcgccaacactttctccagcaccagcacatccaGCCGCTTCCTGCCTTGACTGGAGCGCTTCGGCTGGATGCCGCGGCTg                                                                                                                                          >  8:75420‑M1/103‑149 (MQ=255)
       ccagccagTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtgc                                                                                                                                   >  8:240069/1‑149 (MQ=255)
       ccagccagTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtgc                                                                                                                                   >  5:343342/1‑149 (MQ=255)
         agcgagTGATAGAGTGCGGTTCGTCGCAACGGGTACTGCAGCACAATGTTATTTCGCGTTTTCGCGATGGGCAGGGCGAGGGGTTGCCGGCGGGCCGCTTCGTTCCTTGGCTGGTGCGCTTCGGCTGGATGCCGCGGCTGGATgtgctg                                                                                                                                 <  2:28137/149‑1 (MQ=255)
                gATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGAGTTTGCGCGATGGCCAGGGCGACGCCTTGCCGGCGGGCCCCATCCTGCCTTGGCAGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtcctggtgctg                                                                                                                           >  8:129166/1‑148 (MQ=255)
                 aTAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATgtgctggtgctg                                                                                                                           >  3:310238/1‑147 (MQ=255)
                 aTAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGga                                                                                                                         <  7:19625/149‑1 (MQ=255)
                 aTAGAGTGAGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTGGCGTTTGCGAGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGGTGGATCGCTTCGGCTGGATGCGGCGGCTGGATGTGCTGGTGCTGga                                                                                                                         <  7:129166/149‑1 (MQ=255)
                   agagTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGgag                                                                                                                        >  4:319832/1‑148 (MQ=255)
                    gagTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGgaga                                                                                                                       <  1:217112/148‑1 (MQ=255)
                     agTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGaaa                                                                                                                     >  8:222758/1‑149 (MQ=255)
                     agTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTGCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGaaa                                                                                                                     <  7:222758/149‑1 (MQ=255)
                         cgcTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAgtgt                                                                                                                 <  6:152341/149‑1 (MQ=255)
                           cTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTg                                                                                                               <  2:178857/149‑1 (MQ=255)
                            ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGAt                                                                                                                                       <  1:257566/124‑1 (MQ=255)
                            ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGAt                                                                                                                                       >  2:257566/1‑124 (MQ=255)
                            ttCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTgg                                                                                                              >  4:37561/1‑149 (MQ=255)
                              ccTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTgg                                                                                                              <  3:319832/147‑1 (MQ=255)
                                tCGCAACGGGTACTGCACCACAAAGTTATTTCGAGTTTGAGCGAAGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGGGCTGGAGAAACTGTTGGCGCa                                                                                                          >  4:242532/1‑149 (MQ=255)
                                    aaCGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgc                                                                                                             <  2:340143/142‑1 (MQ=255)
                                    aaCGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgc                                                                                                             >  1:340143/1‑142 (MQ=255)
                                         gTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAgg                                                                                                 <  5:281337/149‑1 (MQ=255)
                                           aCTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgcgc                                                                                                           >  6:66096/1‑137 (MQ=255)
                                           aCTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGgcgc                                                                                                           <  5:66096/137‑1 (MQ=255)
                                               caccacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCAt                                                                                             <  6:139966/147‑1 (MQ=255)
                                                accacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGAc                                                                                          <  6:343342/149‑1 (MQ=255)
                                                 ccacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCt                                                                                                       <  5:190246/135‑1 (MQ=255)
                                                 ccacAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCt                                                                                                       >  6:190246/1‑135 (MQ=255)
                                                  cacaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTg                                                                                                               <  6:26709/126‑1 (MQ=255)
                                                  cacaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTg                                                                                                               >  5:26709/1‑126 (MQ=255)
                                                   acaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCaa                                                                                       <  4:310238/149‑1 (MQ=255)
                                                   acaAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCaa                                                                                       <  3:37561/149‑1 (MQ=255)
                                                    caAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAg                                                                                      >  6:314973/1‑149 (MQ=255)
                                                     aaaGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGt                                                                                     >  2:307877/1‑149 (MQ=255)
                                                             ttCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGGTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGt                                                                             >  3:66524/1‑149 (MQ=255)
                                                               cgcgTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGtt                                                                            <  8:238472/148‑1 (MQ=255)
                                                               cgcgTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGtt                                                                            >  7:233761/1‑148 (MQ=255)
                                                                 cgTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGaa                                                                         <  8:233761/149‑1 (MQ=255)
                                                                   tttGCGCGATGGCGAGGGCGAGGCCTTGCCGGCGGAGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAAc                                                                        >  1:53503/1‑149 (MQ=255)
                                                                                cAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAAc                                                                        >  3:340191/1‑135 (MQ=255)
                                                                                cAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAAc                                                                        <  4:340191/135‑1 (MQ=255)
                                                                                  gggCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCAccc                                                        >  2:272548/1‑149 (MQ=255)
                                                                                   ggCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCt                                                       <  5:314973/149‑1 (MQ=255)
                                                                                         gCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTg                                                                                 <  8:181640/117‑1 (MQ=255)
                                                                                         gCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTg                                                                                 >  7:181640/1‑117 (MQ=255)
                                                                                         gCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGa                                                 <  2:53503/149‑1 (MQ=255)
                                                                                          ccTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGAc                                                <  1:307877/149‑1 (MQ=255)
                                                                                              gCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGAcccc                                             <  1:272548/148‑1 (MQ=255)
                                                                                                cggcggGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAg                                          >  6:256671/1‑149 (MQ=255)
                                                                                                     cagccgcggcatccagccgaagcgctccagtcaaggcaggaagcggcTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGccc                                      >  8:75420‑M2/48‑149 (MQ=255)
                                                                                                      agccgcggcatccagccgaagcgctccagccaaggcaggaagcggcTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCt                                     >  6:357684‑M2/47‑149 (MQ=255)
                                                                                                           cggcatccagccgaagcgctccagtcaaggcaggaagcggcTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAgc                                <  7:75420‑M2/108‑1 (MQ=255)
                                                                                                               cTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGcgcg                             <  5:256671/148‑1 (MQ=255)
                                                                                                                tGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGtt                           >  3:273380/1‑149 (MQ=255)
                                                                                                                   agccgaagcgctccagccaaggcaggaagcggcTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTc                        <  5:357684‑M2/116‑1 (MQ=255)
                                                                                                                    ttGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTTGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCTAGGGAATGACCAATTGCTGGCGTTGAACCTGTCCGCCGCCACCATGGCCGACACCAAGGACCTTCAGCGCGTTTTCg                       >  2:234804/1‑149 (MQ=255)
                                                                                                                       gCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAgc                    <  4:66524/149‑1 (MQ=255)
                                                                                                                         tGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAgctg                  >  5:113554/1‑149 (MQ=255)
                                                                                                                            aGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGGGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAGctgctg               <  7:240069/149‑1 (MQ=255)
                                                                                                                             gcgcTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTgg              >  8:207737/1‑149 (MQ=255)
                                                                                                                                     gCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTg                                                                     <  3:39854/86‑1 (MQ=255)
                                                                                                                                     gCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTg                                                                     >  4:39854/1‑86 (MQ=255)
                                                                                                                                      cTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATg     <  6:113554/149‑1 (MQ=255)
                                                                                                                                         gATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATgcg   <  7:207737/148‑1 (MQ=255)
                                                                                                                                         gATGCCGCGGCTGGATGGGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATgcgg  <  3:242532/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                         
TGTTCTTCCAGCCAGTGATAGAGTGCGCTTCCTCGCAACGGGTACTGCACCACAAAGTTATTTCGCGTTTGCGCGATGGCCAGGGCGAGGCCTTGCCGGCGGGCCGCTTCCTGCCTTGGCTGGAGCGCTTCGGCTGGATGCCGCGGCTGGATGTGCTGGTGCTGGAGAAAGTGTTGGCGCACCTGCGAGGGCATGACCAAGTGCTGGCGTTGAACCTGTCCGCCGCCACCCTGGCCGACCCCAAGGCCCTTCAGCGCGTTTTCGAGCTGCTGGGCCAGAATGCGG  >  NC_002947/189174‑189458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.