New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 375996 = | 50 (0.950) | 5 (0.100) | 3/236 | NT | 10.7% | coding (43/771 nt) | PP_0313 | electron transfer flavoprotein subunit beta |
? | NC_002947 | 376052 = | 37 (0.750) | coding (99/771 nt) | PP_0313 | electron transfer flavoprotein subunit beta |
ACCTGTCGGTGATTGGCGACAGTTCGGCGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCTTGCGCGCTTACCTGGGCATGGGCCTGGAC > NC_002947/375849‑376142 | aCCTGTCGGTGATTGGCGACAGTTCGGCTATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCAccc < 1:220776/149‑1 (MQ=255) tCGGTGAATGGCGACAGTTCGGCGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCAGGAGTACGAAAGAGATCAGCCTGGTATCCATTGGTGCCCACCCCAGCt > 8:270631/1‑149 (MQ=255) agcacgcccagcacatcggccccggccgcttgctccagcacgtcgaggtggtccaggcccatgcccagttaagcgcgcaaggccacttcctgtggaatgcccgcatccaccacctgcaagatatccccacccagcagcaaaCCCAGCTc < 8:281645‑M1/8‑1 (MQ=255) gATTGGCGACAGTTCGGCGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGc > 4:31533/1‑149 (MQ=255) aTTGGCGACAGTTCGGCGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGc < 4:182531/148‑1 (MQ=255) ttCGGCGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCcgcg < 4:187290/141‑1 (MQ=255) ttCGGCGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCcgcg > 3:187290/1‑141 (MQ=255) cGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGGGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGa < 1:285674/149‑1 (MQ=255) tcAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑a > 1:256260/1‑149 (MQ=255) tcAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGCGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑a > 8:237647/1‑149 (MQ=255) cAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAgg > 1:123681/1‑147 (MQ=255) aaGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑At < 2:256260/148‑1 (MQ=255) aaGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑At < 8:118719/148‑1 (MQ=255) gcTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCccgt > 2:278038/1‑149 (MQ=255) gcTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCccgt > 5:145251/1‑149 (MQ=255) gcTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCccgt > 7:281645/1‑149 (MQ=255) gtcgaggtggtccaggcccatgcccaggtaagcgcgcaaggcctcttcctgtggattgcccgcatgcaccacctgcaagttatccccagccagctgcaaaCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCccgtgccgtg < 6:215443‑M1/48‑1 (MQ=255) aGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGa < 3:8081/149‑1 (MQ=255) aGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGCGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGa < 7:237647/149‑1 (MQ=255) gCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCcgccgc < 3:127732/121‑1 (MQ=255) gCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCcgccgc > 4:127732/1‑121 (MQ=255) gtgGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCt < 1:314993/147‑1 (MQ=255) gtgGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCt > 2:314993/1‑147 (MQ=255) gtccaggcccatgcccaggtaagcgcgcaaggcctcttcctgtggattgcccgcatgcaccacctgcaagttatccccagccagctgcaaaCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGt > 5:215443‑M1/92‑148 (MQ=255) gtccaggcccatgcccaggtaagcgcgcaaggcctcttcctgtggattgcccgcatgcaccacctgcaagttatccccagccagctgcaaaCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGt > 6:78998‑M1/92‑148 (MQ=255) aCCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAgct > 5:119203/1‑149 (MQ=255) ccatgcccaggtaagcgcgcaaggcctcttcctgtggattgcccgcatgcaccacctgcaagttatccccagccagctgcaaaCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGt < 5:354563‑M1/57‑1 (MQ=255) ccatgcccaggtaagcgcgcaaggcctcttcctgtggattgcccgcatgcaccacctgcaagttatccccagccagctgcaaaCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGt > 6:354563‑M1/84‑140 (MQ=255) gCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGctggctgg < 2:123681/149‑1 (MQ=255) gCGGCAGCCAGCGCGACGCGGCATAAGCGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTGCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGATCAGT‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGctggctgg < 7:270631/149‑1 (MQ=255) gCAGCCTGCGCGACGCGGCATATGGGCACTAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCGGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGa < 4:249274/149‑1 (MQ=255) gCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGa > 3:220943/1‑149 (MQ=255) gCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGa > 2:221718/1‑149 (MQ=255) ccagcGCGACGCGGCAAAAGGGCACGAGCATGAGTACGAAAGTGATAAGCCTGGTTTCCATTGGTGCCCACCCCAGAACCGGCCGCCCCCGCCGCGCCGACCAGG‑ATGCACGTCCCGTGGAGCTGGGTTTGCAGCTGGAGGGGGAAAAc > 8:49506/1‑149 (MQ=255) agcGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACtt > 6:270739/1‑149 (MQ=255) cgACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAg < 1:221718/149‑1 (MQ=255) gcgGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAggtgg < 3:31533/149‑1 (MQ=255) aGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAgct > 6:132577/1‑118 (MQ=255) gggCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCgg < 5:270739/149‑1 (MQ=255) ggCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCggg < 6:119203/149‑1 (MQ=255) gCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGGCTTGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCggg < 1:278038/149‑1 (MQ=255) gCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTg < 4:60463/131‑1 (MQ=255) gCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTg > 3:60463/1‑131 (MQ=255) cGAGCATGAGTCCGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTATGCAGCTGGCTGGGGATAACTTTCAGGTGGTGCATGCGGGCAAt > 8:272524/1‑149 (MQ=255) cGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAGCTTGCAGGTGGTGCATGCGGGCAAt > 2:9338/1‑149 (MQ=255) gCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGctggctgg > 1:21689/1‑115 (MQ=255) gCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGctggctgg < 2:21689/115‑1 (MQ=255) aTGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCGCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCcaca < 4:220943/149‑1 (MQ=255) gAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGAGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAg > 3:214877/1‑148 (MQ=255) gtaaGTGTTCAGGCTGGTTTCCATTGGTGCCCACGCCAGCTCCGGGCGCGCCCGGCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGTATGCGGGCAATCCACAGGAagag < 7:49506/146‑1 (MQ=255) gAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAgg > 6:219899/1‑149 (MQ=255) aaaGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCTGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGc < 2:91174/149‑1 (MQ=255) aGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCt < 6:145251/149‑1 (MQ=255) ttCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCt < 7:243894/134‑1 (MQ=255) ttCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCt > 8:243894/1‑134 (MQ=255) cATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCATGCGCGCTTACCTGGGc < 1:9338/148‑1 (MQ=255) aTTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCTTGCGCGCTTACCTGGGCAt > 6:276422/1‑149 (MQ=255) cccACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCTTGCGCGCTTACCTGGGCATGGGCCTg > 2:287049/1‑149 (MQ=255) aCCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCTTGCGCGCTTACCTGGGCATGGGCCTGGac > 3:154522/1‑149 (MQ=255) | ACCTGTCGGTGATTGGCGACAGTTCGGCGATTCTCAAGGCGCTGATCGAGGCTGTGGACAACTACCGCAGCGGCAGCCAGCGCGACGCGGCATAAGGGCACGAGCATGAGTACGAAAGTGATCAGCCTGGTTTCCATTGGTGCCCACCCCAGCTCCGGCCGCGCCCGCCGCGCCGAGCAGG‑ATGCCCGTGCCGTGGAGCTGGGTTTGCAGCTGGCTGGGGATAACTTGCAGGTGGTGCATGCGGGCAATCCACAGGAAGAGGCCTTGCGCGCTTACCTGGGCATGGGCCTGGAC > NC_002947/375849‑376142 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |