New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	737628 =	34 (0.640)	4 (0.080)	4/240	NT	10.7%	intergenic (+11/+101)	PP_0629/yacG	membrane protein/DNA gyrase inhibitor YacG
	?	NC_002947	737661 =	35 (0.700)					intergenic (+44/+68)	PP_0629/yacG	membrane protein/DNA gyrase inhibitor YacG

CTGTGGCTGATGATGTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTC  >  NC_002947/737480‑737776                                                                                                                                                     |                                                                                                                                                     cTGTGGCTGATGATGTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGAAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGtggtgg                                                                                                                                                      >  7:57268/1‑149 (MQ=255)          atgatgTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCgg                                                                                                                                             >  3:214616/1‑149 (MQ=255)                          cGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAAt                                                                                                                             >  5:279893/1‑149 (MQ=255)                           gTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATg                                                                                                                            >  7:133643/1‑149 (MQ=255)                                        aTGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCaga                                                                                                               <  8:75952/149‑1 (MQ=255)                                               tAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGcc                                                                                                        <  6:279893/149‑1 (MQ=255)                                                     ttcgggggacctggagccgcggcattgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACt                                                                                                                   <  1:141366‑M1/36‑1 (MQ=255)                                                     ttcgggggacctggagccgcggcattgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACt                                                                                                                   >  2:141366‑M1/97‑132 (MQ=255)                                                     cgcTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTc                                                                                                   <  1:346018/148‑1 (MQ=255)                                                          gtggtgTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCgg                                                                                                                                    <  3:302813/110‑1 (MQ=255)                                                          gtggtgTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCgg                                                                                                                                    >  4:302813/1‑110 (MQ=255)                                                              tgtTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTAc                                                                                         >  4:330766/1‑149 (MQ=255)                                                                 tttGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCa                                                                                                                 >  8:183459/1‑122 (MQ=255)                                                                  ttGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACcgcg                                                                                     >  7:85898/1‑149 (MQ=255)                                                                      cccGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCggg                                                                                 >  7:225704/1‑149 (MQ=255)                                                                          aGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTtgt                                                                             <  7:196697/149‑1 (MQ=255)                                                                           gTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTtgtg                                                                            <  8:85898/149‑1 (MQ=255)                                                                            tGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTgg                                                                           <  8:133643/149‑1 (MQ=255)                                                                             ttgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCaga                                                                                                               >  8:119044‑M1/73‑112 (MQ=255)                                                                             ttgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCaga                                                                                                               <  7:119044‑M1/40‑1 (MQ=255)                                                                               cTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGcc                                                                        >  2:59613/1‑149 (MQ=255)                                                                                 ggAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGTCcg                                                                      >  2:42424/1‑149 (MQ=255)                                                                                    aaCCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGTCCGCGt                                                                   <  1:42424/149‑1 (MQ=255)                                                                                     aCCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGtt                                                                  <  3:330766/149‑1 (MQ=255)                                                                                     aCCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGtt                                                                  <  8:57268/149‑1 (MQ=255)                                                                                       cTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGcaca                                                                                                                        <  4:151861/93‑1 (MQ=255)                                                                                       cTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGcaca                                                                                                                        >  3:151861/1‑93 (MQ=255)                                                                                       cTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCcgcg                                                                    <  4:191705/145‑1 (MQ=255)                                                                                       cTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCcgcg                                                                    >  3:191705/1‑145 (MQ=255)                                                                                          cAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTAt                                                              <  8:225704/148‑1 (MQ=255)                                                                                             ccGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATtggt                                                          >  8:276069/1‑149 (MQ=255)                                                                                                 aacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCtgt                                                                                                                                                  >  8:209819‑M1/53‑57 (MQ=255)                                                                                                 aacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCtgt                                                                                                                                                  <  7:209819‑M1/5‑1 (MQ=255)                                                                                                  cgcgGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATc                                                     <  1:59613/149‑1 (MQ=255)                                                                                                   gcgGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATc                                                     <  1:330033/148‑1 (MQ=255)                                                                                                   gcgGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATc                                                     >  2:330033/1‑148 (MQ=255)                                                                                                      gTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCca                                                                                                >  4:93160/1‑102 (MQ=255)                                                                                                      gTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCca                                                                                                <  3:93160/102‑1 (MQ=255)                                                                                                            gCAGGCGCCCTGGAAGGAAGATGAGCGGGGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATg                                            <  2:166003/148‑1 (MQ=255)                                                                                                               ggCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCcgc                                        <  4:214616/149‑1 (MQ=255)                                                                                                                                     cGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACa                  <  7:276069/149‑1 (MQ=255)                                                                                                                                                  gtggCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGa     >  3:299060/1‑149 (MQ=255)                                                                                                                                                   tggCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAg                                <  7:187996/121‑1 (MQ=255)                                                                                                                                                   tggCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAg                                >  8:187996/1‑121 (MQ=255)                                                                                                                                                     GCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGActc  <  5:56195‑M1/149‑1 (MQ=255)                                                                                                                                                     GCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGActc  <  3:7379‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     CTGTGGCTGATGATGTTCCCCGAGGCGTTCATCAACGGCATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTC  >  NC_002947/737480‑737776

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.