New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	737628 =	34 (0.640)	4 (0.080)	4/240	NT	10.7%	intergenic (+11/+101)	PP_0629/yacG	membrane protein/DNA gyrase inhibitor YacG
	?	NC_002947	737661 =	35 (0.700)					intergenic (+44/+68)	PP_0629/yacG	membrane protein/DNA gyrase inhibitor YacG

ATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTCTTCCGACCCCGCAATCTTG  >  NC_002947/737519‑737795                                                                                                                                               |                                                                                                                                       aTGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCaga                                                                                                                                  <  8:75952/149‑1 (MQ=255)        tAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGcc                                                                                                                           <  6:279893/149‑1 (MQ=255)              ttcgggggacctggagccgcggcattgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACt                                                                                                                                      <  1:141366‑M1/36‑1 (MQ=255)              ttcgggggacctggagccgcggcattgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACt                                                                                                                                      >  2:141366‑M1/97‑132 (MQ=255)              cgcTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTc                                                                                                                      <  1:346018/148‑1 (MQ=255)                       tgtTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTAc                                                                                                            >  4:330766/1‑149 (MQ=255)                          tttGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCa                                                                                                                                    >  8:183459/1‑122 (MQ=255)                           ttGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACcgcg                                                                                                        >  7:85898/1‑149 (MQ=255)                               cccGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCggg                                                                                                    >  7:225704/1‑149 (MQ=255)                                   aGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTtgt                                                                                                <  7:196697/149‑1 (MQ=255)                                    gTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTtgtg                                                                                               <  8:85898/149‑1 (MQ=255)                                     tGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTgg                                                                                              <  8:133643/149‑1 (MQ=255)                                      ttgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCaga                                                                                                                                  <  7:119044‑M1/40‑1 (MQ=255)                                      ttgagctgatccaccaatacaacgcgggcccacaacccgcgcggtacctgtgggagcgggcaagctctgagtGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCaga                                                                                                                                  >  8:119044‑M1/73‑112 (MQ=255)                                        cTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGcc                                                                                           >  2:59613/1‑149 (MQ=255)                                          ggAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGTCcg                                                                                         >  2:42424/1‑149 (MQ=255)                                             aaCCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGTCCGCGt                                                                                      <  1:42424/149‑1 (MQ=255)                                              aCCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGtt                                                                                     <  8:57268/149‑1 (MQ=255)                                              aCCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGtt                                                                                     <  3:330766/149‑1 (MQ=255)                                                cTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCcgcg                                                                                       <  4:191705/145‑1 (MQ=255)                                                cTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCcgcg                                                                                       >  3:191705/1‑145 (MQ=255)                                                   cAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTAt                                                                                 <  8:225704/148‑1 (MQ=255)                                                      ccGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATtggt                                                                             >  8:276069/1‑149 (MQ=255)                                                           cgcgGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATc                                                                        <  1:59613/149‑1 (MQ=255)                                                            gcgGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATc                                                                        <  1:330033/148‑1 (MQ=255)                                                            gcgGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATc                                                                        >  2:330033/1‑148 (MQ=255)                                                               gTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCca                                                                                                                   <  3:93160/102‑1 (MQ=255)                                                               gTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCca                                                                                                                   >  4:93160/1‑102 (MQ=255)                                                                     gCAGGCGCCCTGGAAGGAAGATGAGCGGGGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATg                                                               <  2:166003/148‑1 (MQ=255)                                                                        ggCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCcgc                                                           <  4:214616/149‑1 (MQ=255)                                                                                              cGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACa                                     <  7:276069/149‑1 (MQ=255)                                                                                                       tctgagtgctgtgcattacccccgaagaggccggcacagcACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCaa                                                                 <  7:119044‑M2/72‑1 (MQ=255)                                                                                                       tctgagtgctgtgcattacccccgaagaggccggcacagcACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCaa                                                                 >  8:119044‑M2/41‑112 (MQ=255)                                                                                                           gtggCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGa                        >  3:299060/1‑149 (MQ=255)                                                                                                           agtgctgtgcattacccccgaagaggccggcacagcACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGaa                                         <  1:141366‑M2/96‑1 (MQ=255)                                                                                                           agtgctgtgcattacccccgaagaggccggcacagcACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGaa                                         >  2:141366‑M2/37‑132 (MQ=255)                                                                                                            tggCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAg                                                   <  7:187996/121‑1 (MQ=255)                                                                                                            tggCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAg                                                   >  8:187996/1‑121 (MQ=255)                                                                                                              GCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGActc                     <  5:56195‑M1/149‑1 (MQ=255)                                                                                                              GCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGActc                     <  3:7379‑M1/149‑1 (MQ=255)                                                                                                                          tctTCGGGGGTATTGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTc                                                <  2:62593/110‑1 (MQ=255)                                                                                                                          tctTCGGGGGTATTGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTc                                                >  1:62593/1‑110 (MQ=255)                                                                                                                           ctTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTCTTc                  <  7:284356/139‑1 (MQ=255)                                                                                                                           ctTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTCTTc                  >  8:284356/1‑139 (MQ=255)                                                                                                                                ggggTAATGCACAGCACTCAGAGCTTGCCTGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTCTTCCGACCCCGCAATCtt   >  8:187772/1‑149 (MQ=255)                                                                                                                                 gggTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTCTTCCGACCCCGCAATCTtg  <  4:7379/149‑1 (MQ=255)                                                                                                                                          acagcACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGtt                                                                                     <  7:209819‑M2/52‑1 (MQ=255)                                                                                                                                          acagcACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGtt                                                                                     >  8:209819‑M2/6‑57 (MQ=255)                                                                                                                                               |                                                                                                                                       ATGGTGATAAGTGCGCTGGTGGTGTTTTGCCCCGAGTGGCTGGAAACCTTCAACCGGACGCGGTATTTGCAGGCGCCCTGGAAGGAAGATGAGCGGTGAATGTGTGGTGGCTGTGCCGGCCTCTTCGGGGGTAATGCACAGCACTCAGAGCTTGCCCGCTCCCACAGGTACCGCGCGGGTTGTGGGCCCGCGTTGTATTGGTGGATCAGCTCAATGCCGCGGCTCCAGGTCCCCCGAATACAGCTCATCTTCGGACTCTTCCGACCCCGCAATCTTG  >  NC_002947/737519‑737795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.