New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1215888 =	50 (0.950)	4 (0.080)	4/242	NT	8.9%	coding (1071/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1215925 =	34 (0.680)					coding (1034/4305 nt)	PP_1061	ATP‑dependent DNA helicase

CCAGTTCGCCCTGTCGAACGCAGTCAAGCAAGGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGT  >  NC_002947/1215743‑1216035                                                                                                                                                   |                                                                                                                                                    ctcagcgaccggctgggcaaggaggcggttgccgcacaccatggcagcctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCgg                                                                                                                                                   >  2:160304‑M1/147‑149 (MQ=255)             gTCGAACGCAGTCAAGCAAGGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTgg                                                                                                                                      >  5:62853/1‑149 (MQ=255)                gAACGCAGTCAAGCAAGGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCa                                                                                                                                    <  5:61405/148‑1 (MQ=255)                    gCAGTCAAGCAAGGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCa                                                                                                                               <  2:21034/149‑1 (MQ=255)                        tCAAGCAAGGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTc                                                                                                                           >  1:291206/1‑149 (MQ=255)                         gcggttgccgcacaccatggcagcctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCGGCGAGGCGACCTGGCAGACCAGGTc                                                                                                                           <  2:84539‑M1/27‑1 (MQ=255)                          aagcaagGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGAc                                                                                                                                 >  5:321935/1‑141 (MQ=255)                          aagcaagGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGAc                                                                                                                                 <  6:321935/141‑1 (MQ=255)                          aagcaagGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGa                                                                                                                         >  4:204350/1‑149 (MQ=255)                           agcaagGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGc                                                                                                                                     >  6:113711/1‑136 (MQ=255)                           agcaagGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGc                                                                                                                                     <  5:113711/136‑1 (MQ=255)                                  cAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGAcc                                                                                                                                >  6:256854/1‑134 (MQ=255)                                  cAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGAcc                                                                                                                                <  5:256854/134‑1 (MQ=255)                                   aaCGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTgg                                                                                                                                      <  2:36834/127‑1 (MQ=255)                                   aaCGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTgg                                                                                                                                      >  1:36834/1‑127 (MQ=255)                                   aaCGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCg                                                                                                                 >  3:199027/1‑148 (MQ=255)                                   aaCGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGa                                                                                                                <  2:291206/149‑1 (MQ=255)                                     cGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGata                                                                                                              <  1:14140/149‑1 (MQ=255)                                      gCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGatat                                                                                                             <  8:315685/149‑1 (MQ=255)                                       cATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCa                                                                                                                               >  3:222866/1‑130 (MQ=255)                                       cATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCa                                                                                                                               <  4:222866/130‑1 (MQ=255)                                          tggcagcctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCaa                                                                                                          >  1:84539‑M1/106‑149 (MQ=255)                                                 ctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGat                                                                                                               <  1:145257‑M1/39‑1 (MQ=255)                                                 ctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGat                                                                                                               >  2:145257‑M1/99‑137 (MQ=255)                                                  gTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGata                                                                                                                       <  4:135247/127‑1 (MQ=255)                                                  gTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGata                                                                                                                       >  3:135247/1‑127 (MQ=255)                                                     aTCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGc                                                                                                                   >  5:277684/1‑128 (MQ=255)                                                     aTCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGc                                                                                                                   <  6:277684/128‑1 (MQ=255)                                                      tCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAg                                                                                             <  3:204350/149‑1 (MQ=255)                                                          gTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGAt                                                                                         >  3:292062/1‑149 (MQ=255)                                                              ggTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGCACAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCg                                                                                      >  1:92359/1‑149 (MQ=255)                                                                     aaCAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTAc                                                                              <  6:62853/149‑1 (MQ=255)                                                                        aGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGa                                                                                                                         >  5:216806/1‑103 (MQ=255)                                                                        aGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGa                                                                                                                         <  6:216806/103‑1 (MQ=255)                                                                          gcgcCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCg                                                                                  >  8:194988/1‑140 (MQ=255)                                                                          gcgcCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCg                                                                                  <  7:194988/140‑1 (MQ=255)                                                                                cTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGa                                                                   <  4:292062/149‑1 (MQ=255)                                                                                 ttCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAg                                                                  >  8:197203/1‑149 (MQ=255)                                                                                     gCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTgg                                                              <  7:197203/149‑1 (MQ=255)                                                                                     gCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTgg                                                              <  5:46530/149‑1 (MQ=255)                                                                                            aTCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGctct                                                       <  2:92359/149‑1 (MQ=255)                                                                                                    ggTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGa                                                                   >  5:149158/1‑129 (MQ=255)                                                                                                    ggTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGa                                                                   <  6:149158/129‑1 (MQ=255)                                                                                                                ggC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGctc                                                        >  7:187855/1‑128 (MQ=255)                                                                                                                ggC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGctc                                                        <  8:187855/128‑1 (MQ=255)                                                                                                                 gC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCgg                                                                                     <  5:77556/98‑1 (MQ=255)                                                                                                                 gC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCgg                                                                                     >  6:77556/1‑98 (MQ=255)                                                                                                                 gC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATc                                    >  8:83759/1‑147 (MQ=255)                                                                                                                        ccGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATc                                                                                                            <  6:281726/69‑1 (MQ=255)                                                                                                                             gCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCt                                                                      >  7:43101/1‑102 (MQ=255)                                                                                                                             gCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCt                                                                      <  8:43101/102‑1 (MQ=255)                                                                                                                                        gcAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTg                    >  4:24457/1‑141 (MQ=255)                                                                                                                                        gcAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTg                    <  3:24457/141‑1 (MQ=255)                                                                                                                                          aaTCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAgc                          >  4:294375/1‑133 (MQ=255)                                                                                                                                          aaTCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAgc                          <  3:294375/133‑1 (MQ=255)                                                                                                                                              gAGCCAGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATg      <  4:199027/149‑1 (MQ=255)                                                                                                                                                  ccGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGgtgt  >  5:284585/1‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                    CCAGTTCGCCCTGTCGAACGCAGTCAAGCAAGGCAACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGT  >  NC_002947/1215743‑1216035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.