New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1215888 =	50 (0.950)	4 (0.080)	4/242	NT	8.9%	coding (1071/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1215925 =	34 (0.680)					coding (1034/4305 nt)	PP_1061	ATP‑dependent DNA helicase

AACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCTGAG  >  NC_002947/1215777‑1216070                                                                                                                                                      |                                                                                                                                                  aaCGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGa                                                                                                                                                   <  2:291206/149‑1 (MQ=255)   cGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGata                                                                                                                                                 <  1:14140/149‑1 (MQ=255)    gCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGatat                                                                                                                                                <  8:315685/149‑1 (MQ=255)        tggcagcctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCaa                                                                                                                                             >  1:84539‑M1/106‑149 (MQ=255)               ctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGat                                                                                                                                                  <  1:145257‑M1/39‑1 (MQ=255)               ctgtccaaagcgctgcgcctggatgcggagcagcggctcaagagcggccagctccaggtgctggtagcgaccgcatcgctggagcttggcattgatatCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGat                                                                                                                                                  >  2:145257‑M1/99‑137 (MQ=255)                    tCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAg                                                                                                                                <  3:204350/149‑1 (MQ=255)                        gTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGAt                                                                                                                            >  3:292062/1‑149 (MQ=255)                            ggTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGCACAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCg                                                                                                                         >  1:92359/1‑149 (MQ=255)                                   aaCAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTAc                                                                                                                 <  6:62853/149‑1 (MQ=255)                                        gcgcCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCg                                                                                                                     >  8:194988/1‑140 (MQ=255)                                        gcgcCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCg                                                                                                                     <  7:194988/140‑1 (MQ=255)                                              cTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGa                                                                                                      <  4:292062/149‑1 (MQ=255)                                               ttCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAg                                                                                                     >  8:197203/1‑149 (MQ=255)                                                   gCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTgg                                                                                                 <  7:197203/149‑1 (MQ=255)                                                   gCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTgg                                                                                                 <  5:46530/149‑1 (MQ=255)                                                          aTCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGctct                                                                                          <  2:92359/149‑1 (MQ=255)                                                                  ggTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGa                                                                                                      <  6:149158/129‑1 (MQ=255)                                                                  ggTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGa                                                                                                      >  5:149158/1‑129 (MQ=255)                                                                              ggC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGctc                                                                                           >  7:187855/1‑128 (MQ=255)                                                                              ggC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGctc                                                                                           <  8:187855/128‑1 (MQ=255)                                                                               gC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCgg                                                                                                                        >  6:77556/1‑98 (MQ=255)                                                                               gC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCgg                                                                                                                        <  5:77556/98‑1 (MQ=255)                                                                               gC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATc                                                                       >  8:83759/1‑147 (MQ=255)                                                                                      ccGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATc                                                                                                                                               <  6:281726/69‑1 (MQ=255)                                                                                           gCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCt                                                                                                         <  8:43101/102‑1 (MQ=255)                                                                                           gCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCt                                                                                                         >  7:43101/1‑102 (MQ=255)                                                                                                      gcAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTg                                                       >  4:24457/1‑141 (MQ=255)                                                                                                      gcAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTg                                                       <  3:24457/141‑1 (MQ=255)                                                                                                        aaTCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAgc                                                             >  4:294375/1‑133 (MQ=255)                                                                                                        aaTCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAgc                                                             <  3:294375/133‑1 (MQ=255)                                                                                                          ttgatatcggcgatatcgacctggtctgccaggtcgcctcgccgATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCa                                           >  1:84539‑M2/45‑149 (MQ=255)                                                                                                            gAGCCAGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATg                                         <  4:199027/149‑1 (MQ=255)                                                                                                               atcggcgatatcgacctggtctgccaggtcgcctcgccgATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAg                                                  <  1:145257‑M2/98‑1 (MQ=255)                                                                                                               atcggcgatatcgacctggtctgccaggtcgcctcgccgATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAg                                                  >  2:145257‑M2/40‑137 (MQ=255)                                                                                                                ccGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGgtgt                                     >  5:284585/1‑149 (MQ=255)                                                                                                                           gacctggtctgccaggtcgcctcgccgATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGc                          <  2:84539‑M2/122‑1 (MQ=255)                                                                                                                                  aGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGc                                >  3:238372/1‑136 (MQ=255)                                                                                                                                  aGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGc                                <  4:238372/136‑1 (MQ=255)                                                                                                                                  aGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTg                   >  8:57323/1‑149 (MQ=255)                                                                                                                                    aCCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGcc                 >  1:187326/1‑149 (MQ=255)                                                                                                                                    aCCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGcc                 >  1:181684/1‑149 (MQ=255)                                                                                                                                        ggTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGc             <  3:216024/149‑1 (MQ=255)                                                                                                                                         gTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGcc            <  2:187326/149‑1 (MQ=255)                                                                                                                                         gTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGcc            <  2:181684/149‑1 (MQ=255)                                                                                                                                         attgATATCGGCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGgtg                                      <  7:81966/120‑1 (MQ=255)                                                                                                                                         attgATATCGGCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGgtg                                      >  8:81966/4‑123 (MQ=255)                                                                                                                                         attgATATCGGCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGcc            >  4:286191/4‑149 (MQ=255)                                                                                                                                            gATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCttt                                                        <  3:116398/102‑1 (MQ=255)                                                                                                                                            gATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCttt                                                        >  4:116398/1‑102 (MQ=255)                                                                                                                                                   ccgATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCTGAg  >  2:160304‑M2/4‑149 (MQ=255)                                                                                                                                                      |                                                                                                                                                  AACGCATTCGATCAGGTCATCGCGTGAGGTAGGGAACAGGCGCCCCTTCGGCACACCATCGACCTGGTGTCCAGCGCGGC‑CAACCCGTTGCAGGAAGGCGGCAATCGAGCCCGGCGAGGCGACCTGGCAGACCAGGTCGATATCGCCGATATCAATGCCAAGCTCCAGCGATGCGGTCGCTACCAGCACCTGGAGCTGGCCGCTCTTGAGCCGCTGCTCCGCATCCAGGCGCAGCGCTTTGGACAGGCTGCCATGGTGTGCGGCAACCGCCTCCTTGCCCAGCCGGTCGCTGAG  >  NC_002947/1215777‑1216070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.